Showing 2124 open source projects for "reference"

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  • 1

    mantigorahvps

    A GUI interface to Mantigora high voltage power supply for Linux

    This program implements a GUI interface to Mantigora high voltage power supply for Linux. Dependencies: python-2.7, libftdi (libftdi-1), libftdi-python (libftdi-python-1), PyQt4 (can be installed e.g. from repository of Fedora)
    Downloads: 0 This Week
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  • 2

    Involute Gears DXF

    Open DXFs with QCad

    Program draws a gears tooth for reference profile and Fellows manufacturing. Open dxfs with qcad or Solid Works, ec but not with AutoCad. Autodesk has remouved support for enteties only format.It compiles well with OpenWatcom 1.9 c++ compiler.
    Downloads: 0 This Week
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  • 3
    Mass Difference Calculator

    Mass Difference Calculator

    Mass Difference Calculator with a Graph for MassLynx data

    A Mass Difference Calculator with a graph for MassLynx. Bring in a text file with reference masses and then paste in or browse in another file with a list of mass/intensity pairs. Then look at the best matching points and see what the difference between reference and data comes out as. This is a companion app to ResCalc3
    Downloads: 0 This Week
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  • 4
    Google Authenticator OpenSource

    Google Authenticator OpenSource

    Open source version of Google Authenticator (except the Android app)

    ...The app flow revolves around enrolling secrets via QR codes or manual entry, storing them securely on-device, and rendering rotating codes synchronized by time. Because it uses open standards, it interoperates with virtually any service that supports TOTP/HOTP, not just Google properties. The project also serves as a reference for implementers who want to understand enrollment UX, secret provisioning, and code generation at the application layer.
    Downloads: 0 This Week
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  • 5
    Algorithms in Python

    Algorithms in Python

    Data Structures and Algorithms in Python

    Algorithms in Python is a collection of algorithm and data structure implementations (primarily in Python) meant to serve as both learning material and reference code for engineers. It includes code for graph algorithms, heap data structures, stacks, queues, and more — each implemented cleanly so learners can trace logic and adapt for their problems. The repository is particularly useful for people preparing for competitive programming, job interviews, or building a foundational understanding of algorithmic patterns. ...
    Downloads: 0 This Week
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  • 6

    yaed

    Fast Ellipse Detection

    Real Time Ellipse Detection Algorithm. Reference paper: Michele Fornaciari, Andrea Prati, Rita Cucchiara, "A fast and effective ellipse detector for embedded vision applications", Pattern Recognition, 2014 (http://www.sciencedirect.com/science/article/pii/S0031320314001976)
    Downloads: 0 This Week
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  • 7
    FLAC is a free lossless compressed audio format which supports streaming and archival. The FLAC project maintains the format and provides a reference encoder/decoder and input plugins for several popular audio players.
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    Downloads: 161 This Week
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  • 8
    ingap-cdg

    ingap-cdg

    codon-based de Bruijn graph algorithm for gene construction

    Currently, most gene prediction methods detect coding sequences (CDSs) from transcriptome assembly when lacking of closely related reference genomes. However, these methods are of limited application due to highly fragmented transcripts and extensive assembly errors, which may lead to redundant or false CDS predictions. Here we present a novel algorithm, inGAP-CDG, for effective construction of full-length and non-redundant CDSs from unassembled transcriptomes. inGAP-CDG achieves this by combining a newly developed codon-based de bruijn graph to simplify the assembly process and a machine learning based approach to filter false positives. ...
    Downloads: 0 This Week
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  • 9
    FRAFS Test Pattern

    FRAFS Test Pattern

    Simple Direct3D test pattern generator

    Do you worry if Fraps (or other computer video capture tool) is giving you accurate colors? Do you wish you had some kind of standard, recordable (DirectX 9) source with known colors? Well, you're in luck, that's just what this is. **NOTE: monitor calibration software is known to alter capture colors** See the first screenshot for a guide to what's in this test pattern. It also includes some rare & unusual utilities; see below.
    Downloads: 0 This Week
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  • 10
    Kinannote

    Kinannote

    Protein Kinase Identification and Classification

    Kinannote identifies and classifies protein kinases in a user-provided fasta file using an HMM derived from serine/threonine protein kinases, a position specific scoring matrix derived from the HMM, and comparison with a local version of the curated kinase database from kinase.com. If the user inputs a complete proteome, additional modules evaluate the completeness of the kinome and place it in context with reference kinomes. Kinannote runs on a unix command line and depends on local hmmer 2 and Blast 2.24 installations. Citing Kinannote: Kinannote, a computer program to identify and classify members of the eukaryotic protein kinase superfamily Jonathan M. Goldberg; Allison Griggs; Janet L. Smith; Brian Haas; Jennifer Wortman; Qiandong Zeng Bioinformatics 2013; doi: 10.1093/bioinformatics/btt419 http: http://bioinformatics.oxfordjournals.org/content/29/19/2387.full pdf: http://bioinformatics.oxfordjournals.org/content/29/19/2387.full.pdf+html
    Downloads: 0 This Week
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  • 11
    WebcamStudio For GNU/Linux

    WebcamStudio For GNU/Linux

    A multifeatured virtual webcam software to broadcast over the Internet

    ...For more info about the WebcamStudio project, please visit our Wiki Home page: https://sourceforge.net/p/webcamstudio/wiki/Home/ IMPORTANT: ======= The former homepages of the project: http://code.google.com/p/webcamstudio http://ws4gl.org should be considered only as a reference to old project news, forums, info etc. Have in mind that some of these old links may not work anymore.
    Downloads: 2 This Week
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  • 12

    GenomeDatabase

    For creating a local database of reference genomes

    Genome Database - A tool to create a local database of reference genome sequences Usage: java path/to/GenomeDatabase.jar [options] By Marc Strous, 2016 This tool enables you to download fasta files of protein and RNA sequences encoded in reference genomes at NCBI. You can select relevant genomes with a set of queries. Each query has four fields, separated by comma's. Example of a queries are: superkingdom,Bacteria,genus,ftp superkingdom,Archaea,genus,ftp superkingdom,Eukaryota,phylum,ftp superkingdom,Viruses,family,elink The first query would download (with ftp) all available reference genomes of the superkingdom Bacteria, limited to one genome per genus. ...
    Downloads: 0 This Week
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  • 13

    NConcern

    NConcern is a .NET Runtime AOP (Aspect-Oriented Programming) Framework

    NConcern is a .NET AOP (Aspect-Oriented Programming) Framework written in C# and based on code injection at runtime that reduces tangling caused by cross-cutting concerns. Its role is to introduce AOP paradigm with a minimum cost to maximize quality and productivity.
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  • 14
    TeXsword is an equation management macro package for Microsoft Word. It allows one to: (1) Insert equations with labels (bookmarks). Equations can be referenced further on and are automatically numbered. (2) Use LaTeX to create equations.
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    Downloads: 25 This Week
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  • 15
    Django-bower

    Django-bower

    Easy way to use bower with your django project

    django-bower is a Django app that lets you manage your front-end dependencies using Bower right from your Django project. Instead of manually dropping JavaScript and CSS libraries into your static folders, you declare them as Bower packages and let the app install them to a known location. It then provides Django settings and template tags to point STATICFILES_DIRS or STATIC_ROOT to those installed components. This keeps the back-end and front-end dependency story unified, versioned, and...
    Downloads: 0 This Week
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  • 16
    Spring-Boot-Reference-Guide

    Spring-Boot-Reference-Guide

    Reference guide for Spring Boot

    Spring Boot Reference Guide Chinese translation, "Spring Boot Reference Guide". The Spring Boot reference guide is available as HTML, pdf, and epub documents. Copies of this document may be made for your own use and for distribution to others, provided that you do not charge any fee for such copies and further provided that each copy contains this Copyright Notice, whether distributed in print or electronically.
    Downloads: 0 This Week
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  • 17
    RNAseq Tutorial

    RNAseq Tutorial

    Informatics for RNA-seq: A web resource for analysis on the cloud

    ...It includes working pipelines for alignment, differential expression, alternative splicing, visualization, and interpretation. It is designed to run in the cloud or local environments, providing introductory material on file formats, reference genomes / annotation, QC, mapping, quantifying expression, visualizing results, etc. The version in that repo is deprecated, but still maintains content for those wishing to follow the original published workflow. Includes instruction on cloud computing basics and using cloud environments for large data processing.
    Downloads: 0 This Week
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  • 18

    CYCLOPS simulations

    Cell cycle simulations with anticancer drugs

    ...The sites of action of several anticancer drugs, both cytotoxic agents and targeted agents are incorporated.The code is written in C and can be simulated via commands through the DOS interface or incorporated within other codes and models. A publication reference will be provided in due time.
    Downloads: 0 This Week
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  • 19
    INTEGRATE
    INTEGRATE: Calling gene fusions with exact fusion junctions and genomic breakpoints by combining RNA-Seq and WGS data. To download source code, reference manual and test case, please go to 'Files'. Also refer to 'Wiki' for details.
    Downloads: 5 This Week
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  • 20
    .NET Docs

    .NET Docs

    This repository contains .NET Documentation

    This repository contains the conceptual documentation for .NET. The .NET documentation site is built from multiple repositories. Issues and tasks for all but the API reference repository are tracked here. We have a large community using these resources. We make our best effort to respond to issues in a timely fashion. .NET is a free, open-source development platform for building many types of applications. Share functionality between different applications and application types using class libraries. ...
    Downloads: 0 This Week
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  • 21
    100 numpy exercises

    100 numpy exercises

    100 numpy exercises (with solutions)

    This is a collection of numpy exercises from numpy mailing list, stack overflow, and numpy documentation. I've also created some problems myself to reach the 100 limit. The goal of this collection is to offer a quick reference for both old and new users but also to provide a set of exercises for those who teach. For extended exercises, make sure to read From Python to NumPy. Markdown and ipython notebook are created programmatically from the source data in source/exercises.ktx. To modify the content of these files, please change the text in the source and run the generators.py module with a python interpreter with the libraries under requirements.txt installed. ...
    Downloads: 0 This Week
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  • 22

    Excel file analysis toolkit

    Lays out dependencies (links) between Excel files in a visual graph

    Do you have a haystack (legacy) of Excel files that reference each other and you can't see clear anymore? This tools crawls Excel files and builds up a visual graph. It shows which files might be outdated because they reference a file which was modified more recently. The graph is dynamic, you can choose between different layout algorithms and rearrange by hand. Allows you to quickly open the file, dump the graph, dump all links within a file, highlight all the cells that reference other excel files. ...
    Downloads: 1 This Week
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  • 23
    Devmap

    Devmap

    Web developer development map

    These are books for all time. The best of its kind and important for programmers of all directions. Most of the best courses, reference and training materials are available in English. If difficulties arise, then with knowledge of the English language, the chances of finding an answer on the World Wide Web are higher. Also, if you want to work in a cool prestigious campaign, then without English in any way. Data structures are a software unit that allows you to store and process a lot of the same type and/or logically related data in computer technology. ...
    Downloads: 0 This Week
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  • 24

    Elysia, gestor de colecciones

    Computer application designed to manage and digitalize collections

    Elysia is a computer application designed to manage and digitalize botanical and Natural History collections.
    Downloads: 0 This Week
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  • 25
    PoPoolation TE is a quick and simple pipeline for the analysis of transposable element insertions in (natural) populations using next generation sequencing. PoPoolation TE calculates TE insertion frequencies for TEs that are present in the reference genome as well as for novel TE insertions. PoPoolation TE requires paired-end reads from a pooled population, a reference sequence and transposable element sequences . Documentation: https://sourceforge.net/p/popoolationte/wiki/Main/
    Downloads: 2 This Week
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