Showing 59 open source projects for "data gen"

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  • Software Testing Platform | Testeum Icon
    Software Testing Platform | Testeum

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  • 1
    This software is intended to identify the differentially expressed genes from the given set of genes. The data is input by the user in the form of Comma Delimited (.csv) Microsoft Excel (2007 and above) File.
    Downloads: 0 This Week
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  • 2
    Content Generator for Sketch

    Content Generator for Sketch

    Sketch app plugin for generating dummy data such as avatars and names

    Content generator allows you quickly create dummy data such as avatars, names, geo location data etc. You can create a custom string by combining any of these options, plain text (example: banana), random number from range (example: [0-20] ), random item from an array (example: [banana~apple~grapes] ). In Sketch app use Plugins\Content Generator\Images\Custom plugin to specify path to your own folder with images. Installation via Sketch Plugin Manager, in the 'Catalog' tab of the Sketch Plugin...
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  • 3
    JeeSite

    JeeSite

    A basic enterprise information development platform

    ... as the model view controller, MyBatis as the data access layer, Apache Shiro as the authority authorization layer, Ehcahe for caching common data, and Activit as the workflow engine. It is the best integration in the JavaEE world. JeeSite is mainly positioned in the field of enterprise informatization. It has built-in basic functions of enterprise informatization system and efficient code generation tools.
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  • 4
    PriiDash
    PriiDash(TM) is an enhanced instrument panel and data logger for the Prius and more. Display and record real time data on your car PC via an ELM327 compatible OBD-USB device.
    Downloads: 0 This Week
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  • Build enterprise-ready GenAI experiences with MongoDB Atlas Icon
    Build enterprise-ready GenAI experiences with MongoDB Atlas

    Combine the power of Google Cloud's robust infrastructure with the flexibility and scalability of MongoDB Atlas.

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  • 5

    ITD-Assembler

    A tool to detect mid sized tandem duplications

    This tool uses de novo assembly to detect Tandem Duplications in next gen assembly data. it takes as an input a bam file and outputs results in a custom format. It is linux based and has been developed primarily in haskell, and some parts in C and python.
    Downloads: 0 This Week
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  • 6
    Light Table

    Light Table

    Code editor that connects you to your creation with instant feedback

    Connects you to your creation with instant feedback and showing data values flow through your code. Embed anything you want, from graphs to games to running visualizations. Easily customizable from keybinds to extensions to be completely tailored to your specific project. Everything from eval and debugging to a fuzzy finder for files and commands to fit seamlessly into your workflow. Try new ideas quickly and easily. Ask questions about your software, to give you a more profound understanding...
    Downloads: 1 This Week
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  • 7
    Bio.B-Gen

    Bio.B-Gen

    Initial system (box) generator for biological molecular simulations

    "Bio.B-Gen" is a command line tool to generate initial systems for biological molecular simulations. "Bio.B-Gen" was mainly designed to be used with the GROMACS molecular dynamics simulation package (http://www.gromacs.org). "Bio.B-Gen" depends on the GROMACS topology and force field information (.top and .itp data files) during the generation stage. "Bio.B-Gen" adds specified number of copies of a molecule to an existing configuration to a specified spacial domain inside the system...
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  • 8
    RNG File Shredder

    RNG File Shredder

    A Simple App To Securely Delete Files

    Permanently wipe files from your computer with RNG File Shredder. This app uses random number gen cryptography to overwrite files multiple times scrambling the data beyond recovery before finally deleting the file. Notes: Files are not recoverable. Requires .NET 3.5
    Downloads: 0 This Week
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  • 9

    FASTQSim

    NGS data characterization and in silico read generation

    FASTQSim is a tool that provides the dual functionality of Next-Gen Sequencing dataset characterization and metagenomic data generation. FASTQSim is sequencing platform-independent, and computes distributions of read length, quality scores, indel rates, single point mutation rates, indel size, and similar statistics for any sequencing platform. To create training or testing datasets, FASTQSim has the ability to convert target sequences into in silico reads with matching error profiles...
    Downloads: 0 This Week
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  • 10
    NG-CloudMS

    NG-CloudMS

    Next Gen Cloud Management System (NG-CloudMS)

    Next Gen Cloud Management System (NG-CloudMS) is a new web based end-to-end OCX management tool that is distributed by Opt/Net under GNU Public License (GPL). This prototype provides near real-time visibility of the networks and cloud infrastructures and interconnected computing and data storage resources. It therefore can assist the operators with visualisation and localization of the causes of potential incidents.
    Downloads: 0 This Week
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  • 11
    The NHibernate generation project uses a set of templates and a code generation engine such as CodeSmith to generate a set of Common POCO's (plain old c# objects), Business Objects, Data Access Controls, Unit tests, and sample web pages.
    Downloads: 0 This Week
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  • 12

    MendelChecker

    QC for variant discovery from next gen sequence in pedigrees

    MendelChecker is a likelihood-based measure of Mendelian segregation of Single Nucleotide Polymorphisms (SNPs) in nuclear pedigrees. We developed this method as a quality control measure for novel variant discovery from noisy next-generation sequencing data in pedigrees, such as Restriction site-associated DNA Sequencing (RAD-seq) in non-model organisms. This method implements comparison of heterogametic vs. homogametic transmission, i.e., sex linked vs. autosomal segregation.
    Downloads: 0 This Week
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  • 13
    SeoToaster eCommerce Shopping Cart & CMS

    SeoToaster eCommerce Shopping Cart & CMS

    100% OOP Next Gen CMS and Ecommerce Shopping Cart Solution

    SeoToaster is the most advanced SEO & marketing CMS and eCommerce shopping cart platform that can be used right out of the box, with no plug-ins required. The SeoToaster content management system features a uniquely intuitive content management system interface, combined with powerful automated marketing. W3C compliant HTML code generation, no layout restriction, unbreakable theming system, unmatched SEO, or automated merchandising are just few of the many built-in SeoToaster...
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  • 14
    PennCNV-2 is the second major release of the popular program PennCNV, which was originally designed for inferring copy number variation in germline DNA using data from genotyping microarrays. PennCNV-2 now supports inference of copy number abberrations in tumor cells (PennCNV-tumor). New functionality for inference of copy number variation using next gen sequencing data is under development (PennCNV-Seq). The software is written in C++ and targeted for unix/linux platforms.
    Downloads: 0 This Week
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  • 15
    GenomeRunner

    GenomeRunner

    Annotation and enrichment of Next-Gen sequencing data

    Note: This version requires additional SQLite database files. Contact the developers to obtain them. Use http://www.integrativegenomics.org/ for the latest data and analyses. GenomeRunner is a tool for automating genome exploration. It performs annotation and enrichment analyses of user-provided genomic regions (SNPs, ChIP-seq binding sites etc.) against >6,000 (human genome) epigenomic features available from the UCSC genome browser. Input - any genome-wide data data in .bed format...
    Downloads: 0 This Week
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  • 16
    DATA Gen™

    DATA Gen

    DATA Gen™ - Test Data Generator to generate realistic test data.

    DATA Gen™ Test Data Generator offers facilities to automate the task of creating test data for new or existing data bases. It helps lower the programming effort required, while reducing manual test data generation errors and the ripple effect that they cause on production systems, users and maintenance.
    Downloads: 0 This Week
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  • 17

    qure

    software for viral quasispecies reconstruction from next-gen seq. data

    QuRe is a program for viral quasispecies reconstruction, specifically developed to analyze long read (>100 bp) NGS data. The software performs alignments of sequence fragments against a reference genome, finds an optimal division of the genome into sliding windows based on coverage and diversity and attempts to reconstruct all the individual sequences of the viral quasispecies--along with their prevalence--using a heuristic algorithm, which matches multinomial distributions of distinct viral...
    Downloads: 1 This Week
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  • 18

    dhcp-gen

    dhcpd.conf generator

    dhcp-gen is a perl script that was written by me and Trond Erik Dalho to simplify editing dhcpd.conf for adding static ip to computers and equipment on our school. It also made it easier to do manage the network by limiting some computers access to the local network only. Creating closed networks. And it also worked as a database over all our computers and equipment, making it easier to keep track of everything. All information about equipment is stored inside csv files which are comma...
    Downloads: 0 This Week
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  • 19

    mubiomics

    Scripts for processing next-gen sequencing data

    A set of scripts (mostly python) for processing reads generated by the Roche 454 or Illumina next-gen sequencing platforms. Included are quality control, read demultiplexing and microbiome characterisation scripts for use with usearch, pplacer and RDP classifier. The package was used to produce the data presented in Smith et al. (2012) "The Cervical Microbiome over 7 Years and a Comparison of Methods for its Characterization".
    Downloads: 0 This Week
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  • 20

    HPCall

    Improved base-calling for homopolymer-sensitive next-gen data.

    The current software contains the implementation for the 454 pyrosequencing platform.
    Downloads: 0 This Week
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  • 21
    PAICE is a rapid bioinformatics pathway visualization tool for KEGG-compatible accessions derived from Illumina Solexa next-gen and Affymetrix datasets. It colors KEGG pathways while appreciating detection-calls and duplicate gene copies.
    Downloads: 0 This Week
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  • 22
    Swift is an open source package for primary data analysis on next-gen sequence data "from images to basecalls". Currently Swift is targeted toward Solexa/Illumina sequencing, but is designed to be platform agnostic.
    Downloads: 0 This Week
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  • 23
    An object oriented form generator. Once implemented an array of fields and field options can be set from which the form can be generated. Once submitted the form can retrieve the data based on the set method and display it in the form.
    Downloads: 0 This Week
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  • 24
    A simple, fast, finite state machine (fsm) C code generator using an awk script to read a fsm specification (state, event, action, next state) to produce data for use by included transition function. You provide the fsm spec and the action functions.
    Downloads: 0 This Week
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  • 25
    16s Ribosomal DNA analysis software. It includes a modified version of the Ribosomal Database Project's classification algorithm, as well as chimera detection. It is geared toward high-throughput classification of shorter, next-gen sequence data.
    Downloads: 0 This Week
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