If jEdit is configured to keep eye on external file
modification (i.e. by external project) it popup a
requester and ask to reload the file. But if if
proceed, jedit will properly reload the file but forget
cursor position and instead of putting it in the same
line/column (or nearest) it moves it the 1st line. Damn
annoying.
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See posting on jEdit-user with "Smart_Reload" macro.
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fixed in 3.2pre6.