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ESTScan is a program that can detect coding regions in DNA/RNA sequences, even if they are of low quality (e.g. EST sequences). ESTScan will also detect and correct sequencing errors that lead to frameshifts.


http://estscan.sourceforge.net





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Release Date:

2009-06-17

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Programming Language:

C

Registered:

2004-12-14

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  • estscan 3.0.3 file released: estscan-3.0.3.tar.gz

    2009-06-17 09:40 c4chris * estscan.c, estscan.spec: Bump to version 3.0.3. 2009-02-18 18:09 c4chris * makesmat.c: Add some sanity checks on FASTA header line format. 2007-03-27 16:47 c4chris * estscan.spec: Update changelog.

    posted 146 days ago

  • estscan 3.0.3 file released: estscan-3.0.3-0.src.rpm

    2009-06-17 09:40 c4chris * estscan.c, estscan.spec: Bump to version 3.0.3. 2009-02-18 18:09 c4chris * makesmat.c: Add some sanity checks on FASTA header line format. 2007-03-27 16:47 c4chris * estscan.spec: Update changelog.

    posted 146 days ago

  • BTLib 0.19 file released: perl-BTLib-0.19-0.fc11.src.rpm

    2009-06-17 09:15 c4chris * perl-BTLib.spec: Remove || : after %%check. 2009-06-17 09:02 c4chris * BTFile.pm, BTLib.pm, EMBLEntry.pm, EMBLFile.pm, EPDEntry.pm, EPDFile.pm, FASTAEntry.pm, FASTAFile.pm, GBEntry.pm, GBFile.pm, LitRef.pm, SPEntry.pm, SPFile.pm, UGEntry.pm, UGFile.pm, perl-BTLib.spec: Bump to version 0.19. 2008-11-04 15:02 c4chris * BTLib.pm: Also translate ambiguous nucleotides.

    posted 146 days ago

  • BTLib 0.19 file released: BTLib-0.19.tar.gz

    2009-06-17 09:15 c4chris * perl-BTLib.spec: Remove || : after %%check. 2009-06-17 09:02 c4chris * BTFile.pm, BTLib.pm, EMBLEntry.pm, EMBLFile.pm, EPDEntry.pm, EPDFile.pm, FASTAEntry.pm, FASTAFile.pm, GBEntry.pm, GBFile.pm, LitRef.pm, SPEntry.pm, SPFile.pm, UGEntry.pm, UGFile.pm, perl-BTLib.spec: Bump to version 0.19. 2008-11-04 15:02 c4chris * BTLib.pm: Also translate ambiguous nucleotides.

    posted 146 days ago

  • estscan-3.0.3 and BTLib-0.19 have been released

    ESTScan is a program that can detect coding regions in DNA/RNA sequences. BTLib is a small footprint perl library useful for parsing, indexing, and retrieving entries from EMBL, GenBank, and SwissProt flat files. There are minor changes wrt the previous release: - BTLib now correctly translates ambiguous nucleotides when performing a reverse complement of a sequence - a crash on incorrect input was fixed in the makesmat program from the estscan package. The estscan program itself was not changed. Enjoy, Christian

    posted by c4chris 146 days ago

  • File released: /estscan/3.0.3/estscan-3.0.3-0.src.rpm

    posted 146 days ago

  • File released: /estscan/3.0.3/estscan-3.0.3.tar.gz

    posted 146 days ago

  • Code committed

    c4chris committed patchset 40 of module ESTScan to the ESTScan CVS repository, changing 1 files

    posted by c4chris 146 days ago

  • Code committed

    c4chris committed patchset 39 of module ESTScan to the ESTScan CVS repository, changing 2 files

    posted by c4chris 146 days ago

  • File released: /BTLib/0.19/perl-BTLib-0.19-0.fc11.src.rpm

    posted 146 days ago

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