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#27 Inconsistent header lines in result files

closed
5
2011-06-07
2011-01-25
Anonymous
No

The result files of the test cases (XXXXX-results.csv) have an inconsistent header line (in release sbml-test-cases-2010-10-06.zip). Some test cases denote the species values with a prefix "caseXXXXX`" and others don't.

For example the header lines of the first 20 test cases are:
00001: time,S1,S2
00002: time,S1,S2
00003: time,S1,S2
00004: time,S1,S2
00005: time,S1,S2
00006: time,S1,S2
00007: time,S1,S2
00008: time,S1,S2
00009: time,S1,S2
00010: time,case00010`S1,case00010`S2,case00010`S3
00011: time,S1,S2,S3
00012: time,S1,S2,S3
00013: time,S1,S2,S3
00014: time,case00014`S1,case00014`S2,case00014`S3
00015: time,case00015`S1,case00015`S2,case00015`S3,case00015`S4
00016: time,case00016`S1,case00016`S2,case00016`S3,case00016`S4
00017: time,case00017`S1,case00017`S2,case00017`S3,case00017`S4
00018: time,S1,S2,S3,S4
00019: time,case00019`S1,case00019`S2,case00019`S3,case00019`S4
00020: time,case00020`S1,case00020`S2,case00020`S3,case00020`S4

It would help a lot parsing these files, if one kind of referring to species would be used for all test cases.

Discussion

  • Michael Hucka

    Michael Hucka - 2011-01-26

    This is definitely inconsistent. Our apologies for this. The "cases" variant arose from some of the old Mathematica code we used, and the names should be changed.

    I just committed a correction to all the files in SVN. We'll issue a new release of the cases archive soon.

    Thanks for reporting this.

     
  • Michael Hucka

    Michael Hucka - 2011-06-07

    This was fixed some time ago. Closing the tracker item.

     
  • Michael Hucka

    Michael Hucka - 2011-06-07
    • status: open --> closed
     

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