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#197 Package for Level 3: stat package

Rejected-No_action
closed
nobody
5
2014-04-04
2011-06-29
No

This is the tracker item for the proposal for an SBML Level 3 package that enables to encode:

1) hierarchical modelling of parameter values across a population of individuals
levels of uncertainty. E.g. parameter variable over population of cells. Several recording of the cells.
Refers to the data, and put the semantics

2) observation models (relating the output of the model to process generating the experimental data)
e.g. measurement of flueorescence over time, model of GFP over time
conditional probability of experimental data given the model
We have the necessary constructs in the distrib package. But we need the specific placeholders.
We need to list what are the kind of data.

3) prior distributions

Cf: http://sbml.org/Events/Other_Events/statistical_models_workshop_2011

Discussion

  • Michael Hucka
    Michael Hucka
    2011-10-24

    Updated the subject line to follow the style of other similar tracker items.

     
  • Michael Hucka
    Michael Hucka
    2011-10-24

    • summary: Stat package --> Package for Level 3: stat package
     
  • Lucian Smith
    Lucian Smith
    2014-04-04

    • status: open --> closed
    • Group: --> Rejected-No_action
     
  • Lucian Smith
    Lucian Smith
    2014-04-04

    Packages as a whole ended up being dealt with in a completely different manner than being tracked here.