[Samtools-devel] number of alignments(reads) per chromosome

[Didar <m.a...@gm...>]

Hello samtools developers,

I'd like to know if there is a way to know how many alignments are
there per chromosome in a bam file.
If header (or footer?) does not have it, is there a way to calculate
number of alignments or reads?

Regards
Didar