MeV / News: Recent posts

The latest bugfix release of MeV, v4.4.1, is now available for download at www.tm4.org. This release contains several small bug fixes. The MeV team recommends that all MeV users upgrade to this newest version.

• State-saving optimizations in the TTEST and SAM modules. • Fixed problem in Rank Products analysis that prevented two-class unpaired from running more than 40 samples.
• Fixed GUI issues with Cluster Manager.
• Changed display of node heights for Hierarchical Clustering.
• Fixed cluster storing dialog box bug- dialog box could not be cancelled.
• When launched via Java Webstart, MeV now loads data with correct row indexing
• Table links to external GO databases now support multiple terms.
• Chromosomal location end-coordinates are now loaded fully, rather than with a truncated last digit
• Annotation fields are now re-loaded in the same order they were saved in.
• Hypergeometrc distribution is now calculated correctly.... read more

The grant that funds MeV development is up for renewal and we are seeking letters of support from users of the application. Please consider adapting our draft letter to indicate your support of MeV and help us continue development on a free, open-source Bioinformatics tool.

http://www.tm4.org/mev/request_for_letters.html

The MeV development team is proud to announce the release of MeV v4.4.
It is now available for download at the TM4 website, http://www.tm4.org/.

Please visit the TM4 Forums to get help or suggest improvements to the
program: http://sourceforge.net/forum/?group_id=110558

Please consider filling out the MeV Survey. Doing so will let us know the things you do and don't like about MeV.
http://www.surveymonkey.com/s.aspx?sm=SW8XJGJh_2byyKgpRDSOdY3w_3d_3d... read more

The latest bugfix release of MeV, v4.3.02, is now available for download at www.tm4.org. This release contains several small bug fixes. The MeV team recommends that all MeV users upgrade to this newest version.

Bug fixes:
* ResourceManager downloads via HTTP now have a more reasonable timeout setting.
* The ResourceManager will now download files provided by servlets.
* The EASE initialization dialog box would not initialize when custom annotation files were loaded.
* The color-coding of result nodes in TEASE were not set properly.
* Tav file loader was not loading preferences files. This has been fixed.
* Launching new session from a cluster bug repaired.... read more

The MeV development team is proud to announce the release of MeV v4.3.
It is now available for download at the TM4 website, http://www.tm4.org/.
MeV v4.3 Major additions

Gene Set Enrichment Analysis (GSEA) Module
GSEA is a computational method that determines whether an a priori defined set of genes shows statistically significant, concordant differences between two biological states (e.g. phenotypes). From Jiang, Z., Gentleman, R., 2007. Extensions to gene set enrichment analysis. Bioinformatics., 23(3):306-13.... read more