From: Tony P. <po...@gm...> - 2012-05-24 20:22:53
|
Hi Lacey, After doing what you requested, the organisms page looks the same (no link), but I guess you were expecting that. What is strange is that, after doing the update on the editing area, I can see that the links appear on the last column. I'm also sending another screenshoot showing that. I hope it helps. Thank you very much, Tony On Thu, May 24, 2012 at 7:49 PM, Lacey-Anne Sanderson <lac...@sh...> wrote: > Hi Tony, > > Hmm… the broken/missing handlers should not be causing this problem (though > it's another bug you've helped us to find :)). If you could follow these > steps and then take a screenshot of the page with the organism table that > would be very helpful: > 1. Remove the broken handlers > - click on the up/down arrow in the fields header > - click the circle with the line through it (think no smoking sign) beside > each of the Number * fields > - click "Update" > 2. Add Node ID/Title fields > - click the + beside the fields header > - Select Node from the Groups drop down > - Then put a checkmark beside "Node: Nid" and "Node: Title" > - Click Add > - Click update leaving the defaults for each of the dialogs configuring each > field > - Click Save for your view > 3. Take a screenshot of the table (i.e.: go to 'View "Page"' at the top of > the page) and send it to me :) > > Sorry for the hassle -Thanks! > ~Lacey > > PS. I just thought I'd make the instructions as detailed as possible b/c I > wasn't sure how much you've used views. This > (http://gotdrupal.com/videos/drupal-views-tutorial) is a really good video > (If you have problems viewing it just download it first) showing you the > basics of views. > > On 2012-05-24, at 11:47 AM, Tony Power wrote: > > Hi Lacey, > > I can see the changes on the organism/analysis. > I can access to the organism/analyis. The links can be found in: "Home > › Administer › Content management › Content". I guess this should > answer to your question about the details in chado, right? > > Chado is inside the drupal database. > > About the last point, I am sending you a screenshot of "Views > Edit" > and, I guess, the problem should be related to: > Broken/missing handler: organism > num_features > Broken/missing handler Number of Stocks > Broken/missing handler Number of Libraries > > How can I fix it? I don't know a lot about views, but if you let me > know what to do, I'll fix it. > > Thank you very, > Tony > > > On Thu, May 24, 2012 at 4:25 PM, Lacey-Anne Sanderson > <lac...@sh...> wrote: > > > Hi Tony, > > > After you edit the organism/analysis do you see your changes reflected on > the page for that particular organism/analysis? or do you find that all the > details stored in chado disappear (i.e.: no common_name, genus, etc.)? > > > Is chado and drupal in the same database in your installation (If you > installed chado using Tripal then it is) ? If it is can you add the node ID > and node title to your view and tell me what you get in those columns for > the edited organism/analysis versus the newly created ones? > > > Thanks! > > ~Lacey > > > PS. I am also unable to reproduce this on Ubuntu. > > > On 2012-05-24, at 8:14 AM, Stephen Ficklin wrote: > > > Hi Lacey, > > > I'm stumped on this one. Any idea what would cause the view to not link to > the node when he edits an organism? I can't reproduce the error. But he > uses a more secure version of Debian that has strict PHP turned on. So, > perhaps that may have an effect. > > > Stephen > > > -------- Original Message -------- > > Subject: Re: [Gmod-tripal-devel] object from empty value > > Date: Thu, 24 May 2012 14:41:28 +0100 > > From: Tony Power <po...@gm...> > > To: Stephen Ficklin <spf...@gm...> > > CC: gmo...@li... > > > > Hi Stephen, > > > It's fine now. > > Nevertheless, there is something that happens all the time. I have no > > idea of what it could be. > > When I edit either an organism or an analysis, I lose the link the > > organism/analysis on the organisms (or analyses) page. > > As you previously showed me, I can create a direct link in the menu, > > but if I wanted to have 20 organisms (analyses), that would be a > > problem. > > Is that a known issue? > > > Thanks, > > Tony > > > On Thu, May 24, 2012 at 2:18 PM, Stephen Ficklin <spf...@gm...> > wrote: > > Hi Tony, > > > Looks like another one of those missing stdClass definitions. I adjusted > > the code to fix it and committed the change. Let me know if you still have > > the problem. > > > Stephen > > > > On 5/24/2012 7:02 AM, Tony Power wrote: > > > Hi all, > > > This happened after the creation of an analysis: > > > warning: Creating default object from empty value in > > > /etc/drupal/6/sites/all/modules/tripal/tripal_analysis/tripal_analysis.module > > on line 496. > > > Cheers, > > Tony > > > > ------------------------------------------------------------------------------ > > Live Security Virtual Conference > > Exclusive live event will cover all the ways today's security and > > threat landscape has changed and how IT managers can respond. Discussions > > will include endpoint security, mobile security and the latest in malware > > threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ > > _______________________________________________ > > Gmod-tripal-devel mailing list > > Gmo...@li... > > https://lists.sourceforge.net/lists/listinfo/gmod-tripal-devel > > > > > > <Screenshot from 2012-05-24 18:27:35.png> > > |