[Gmod-apollo-cmts] CVS: apollo/src/java/apollo/gui DataLoader.java,1.51,1.52 GenericFileAdapterGUI.java,1.10,1.11 SortedFeatureSet.java,1.2,NONE

[Suzanna L. <su...@us...>]

Update of /cvsroot/gmod/apollo/src/java/apollo/gui
In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv16829/apollo/gui

Modified Files:
	DataLoader.java GenericFileAdapterGUI.java 
Removed Files:
	SortedFeatureSet.java 
Log Message:

added initial genbank reader



Index: DataLoader.java
===================================================================
RCS file: /cvsroot/gmod/apollo/src/java/apollo/gui/DataLoader.java,v
retrieving revision 1.51
retrieving revision 1.52
diff -C2 -d -r1.51 -r1.52
*** DataLoader.java	25 Feb 2004 00:35:05 -0000	1.51
--- DataLoader.java	29 Feb 2004 20:22:45 -0000	1.52
***************
*** 447,450 ****
--- 447,452 ----
        }
        if (seq != null && seq.getLength() > 0) {
+         System.out.println (curation_set.getName() + " results = " +
+                             curation_set.getResults());
          curation_set.getResults().setRefSequence(seq);
          curation_set.getAnnots().setRefSequence(seq);

Index: GenericFileAdapterGUI.java
===================================================================
RCS file: /cvsroot/gmod/apollo/src/java/apollo/gui/GenericFileAdapterGUI.java,v
retrieving revision 1.10
retrieving revision 1.11
diff -C2 -d -r1.10 -r1.11
*** GenericFileAdapterGUI.java	13 Jun 2003 18:31:38 -0000	1.10
--- GenericFileAdapterGUI.java	29 Feb 2004 20:22:45 -0000	1.11
***************
*** 35,51 ****
    int pathListWidth=500;//300;
  
    public GenericFileAdapterGUI(IOOperation op) {
      this.op = op;
  
      pathList     = new JComboBox();
      filePaths    = new Vector();
      browseButton = new JButton("Browse...");
      typeLabel    = new JLabel("File type not set");
- 
      pathList.setEditable(true);
- 
-     buildGUI();
-     attachListeners();
- 
    }
  
--- 35,53 ----
    int pathListWidth=500;//300;
  
+   public GenericFileAdapterGUI() {}
+ 
    public GenericFileAdapterGUI(IOOperation op) {
      this.op = op;
+     initGUI();
+     buildGUI();
+     attachListeners();
+   }
  
+   public void initGUI () {
      pathList     = new JComboBox();
      filePaths    = new Vector();
      browseButton = new JButton("Browse...");
      typeLabel    = new JLabel("File type not set");
      pathList.setEditable(true);
    }
  
***************
*** 81,89 ****
    public void attachListeners() {
      browseButton.addActionListener( new ActionListener() {
!                                       public void actionPerformed(ActionEvent e) {
! 					  browseFiles(pathList);
!                                       }
!                                     }
!                                   );
    }
  
--- 83,91 ----
    public void attachListeners() {
      browseButton.addActionListener( new ActionListener() {
!         public void actionPerformed(ActionEvent e) {
!           browseFiles(pathList);
!         }
!       }
!                                     );
    }
  
***************
*** 135,140 ****
    }
  
!   /** Populates filePaths Vector from historyItems Properties "in" and sets the model
!    * of the pathList ComboBox
     */
    public void setProperties(Properties in) {
--- 137,142 ----
    }
  
!   /** Populates filePaths Vector from historyItems Properties
!       "in" and sets the model of the pathList ComboBox
     */
    public void setProperties(Properties in) {

--- SortedFeatureSet.java DELETED ---