[Gmod-apollo-cmts] CVS: apollo/src/java/apollo/gui DetailInfo.java,1.22,1.23

[Mark G. <mg...@us...>]

Update of /cvsroot/gmod/apollo/src/java/apollo/gui
In directory sc8-pr-cvs1:/tmp/cvs-serv7884/src/java/apollo/gui

Modified Files:
	DetailInfo.java 
Log Message:
Encoded the Transcript kludge in DetailInfo.getPropertyType in 
FlyNameAdapter.getBioTypeForDisplay. I think name displaying issues
belong in the name adapters, where a programmer can encode their own
name preferences for their organism.
So FeatureEditPanel now uses NameAdapter.getBioTypeForDisplay to get
the type for its lower panel. In following the rules that seemed to be
in place, if its a transcript of something other than a gene, than use
the parents biotype. I tacked on "transcript" at the end, which seemed
appropriate. Nomi feel free to adjust this to your liking. 

Hope this makes the types issue easier. Why I feel it belongs in the
name adapter is that it seemed like display wanted it one with gene
transcripts and another way with all other transcripts. This didnt
seem like a general naming scheme to me, but something that was
appropriate for a name adapter.



Index: DetailInfo.java
===================================================================
RCS file: /cvsroot/gmod/apollo/src/java/apollo/gui/DetailInfo.java,v
retrieving revision 1.22
retrieving revision 1.23
diff -C2 -d -r1.22 -r1.23
*** DetailInfo.java	23 Apr 2003 00:35:26 -0000	1.22
--- DetailInfo.java	29 Apr 2003 20:10:43 -0000	1.23
***************
*** 365,370 ****
        Config.getPropertyScheme().getFeatureProperty(feature.getType());
      String type = property.getDisplayType();
!     if (type.equalsIgnoreCase("gene") && feature instanceof Transcript)  // kludge
!       return "Transcript";
      else
        return type;
--- 365,372 ----
        Config.getPropertyScheme().getFeatureProperty(feature.getType());
      String type = property.getDisplayType();
!     // But transcripts are in the gene visual type. 
!     // FlyNameAdapter.getBioTypeForDisplay now deals with this issue
!     //if (type.equalsIgnoreCase("gene") && feature instanceof Transcript)  // kludge
!     //return "Transcript";
      else
        return type;