[Gmod-apollo-cmts] CVS: apollo/conf apollo.cfg,1.22,1.23 apollo.internal.cfg,1.1,1.2

[Nomi H. <no...@us...>]

Update of /cvsroot/gmod/apollo/conf
In directory sc8-pr-cvs1:/tmp/cvs-serv9655

Modified Files:
	apollo.cfg apollo.internal.cfg 
Log Message:

put synteny adapter last in data adapter list, because if something throws an
exception while the data adapters are being loaded, no further data adapters
are loaded!


Index: apollo.cfg
===================================================================
RCS file: /cvsroot/gmod/apollo/conf/apollo.cfg,v
retrieving revision 1.22
retrieving revision 1.23
diff -C2 -d -r1.22 -r1.23
*** apollo.cfg	18 Apr 2003 19:37:24 -0000	1.22
--- apollo.cfg	21 Apr 2003 17:29:24 -0000	1.23
***************
*** 71,78 ****
  DataAdapterInstall	"apollo.dataadapter.GFFAdapter" "gff.style"
  DataAdapterInstall	"apollo.dataadapter.EnsCGIAdapter" "ensembl.style"
- // Uncomment if you want to read synteny data from Ensembl databases
- //DataAdapterInstall	"apollo.dataadapter.synteny.SyntenyAdapter" "synteny.style"
- // OR uncomment if you want to read synteny data from GFF files
- //DataAdapterInstall	"apollo.dataadapter.synteny.SyntenyAdapter" "synteny.style.gff"
  CGIHost                 "www.ensembl.org"
  DataAdapterInstall	"apollo.dataadapter.ensj.AnnotationEnsJAdapter" "ensj.style"
--- 71,74 ----
***************
*** 81,84 ****
--- 77,84 ----
  // DAS adapter not working well yet
  //DataAdapterInstall	"apollo.dataadapter.das.simple.SimpleDASAdapter" "simpledas.style"
+ // Uncomment if you want to read synteny data from Ensembl databases
+ //DataAdapterInstall	"apollo.dataadapter.synteny.SyntenyAdapter" "synteny.style"
+ // OR uncomment if you want to read synteny data from GFF files
+ //DataAdapterInstall	"apollo.dataadapter.synteny.SyntenyAdapter" "synteny.style.gff"
  
  // Name of web browser on your system.  If you have a Mac or PC, you

Index: apollo.internal.cfg
===================================================================
RCS file: /cvsroot/gmod/apollo/conf/apollo.internal.cfg,v
retrieving revision 1.1
retrieving revision 1.2
diff -C2 -d -r1.1 -r1.2
*** apollo.internal.cfg	18 Apr 2003 19:38:02 -0000	1.1
--- apollo.internal.cfg	21 Apr 2003 17:29:24 -0000	1.2
***************
*** 71,78 ****
  DataAdapterInstall	"apollo.dataadapter.GFFAdapter" "gff.style"
  DataAdapterInstall	"apollo.dataadapter.EnsCGIAdapter" "ensembl.style"
- // Use the line below (and then comment out the "synteny.style.gff" one) if you
- // want to read synteny data from Ensembl databases
- //DataAdapterInstall	"apollo.dataadapter.synteny.SyntenyAdapter" "synteny.style"
- DataAdapterInstall	"apollo.dataadapter.synteny.SyntenyAdapter" "synteny.style.gff"
  CGIHost                 "www.ensembl.org"
  DataAdapterInstall	"apollo.dataadapter.ensj.AnnotationEnsJAdapter" "ensj.style"
--- 71,74 ----
***************
*** 81,84 ****
--- 77,84 ----
  // DAS adapter not working well yet
  //DataAdapterInstall	"apollo.dataadapter.das.simple.SimpleDASAdapter" "simpledas.style"
+ // Use the line below (and then comment out the "synteny.style.gff" one) if you
+ // want to read synteny data from Ensembl databases
+ //DataAdapterInstall	"apollo.dataadapter.synteny.SyntenyAdapter" "synteny.style"
+ DataAdapterInstall	"apollo.dataadapter.synteny.SyntenyAdapter" "synteny.style.gff"
  
  // Name of web browser on your system.  If you have a Mac or PC, you