did the compilation tests succeed? Yes have you correctly declared the needed variables?...
Tutorials Docking in 3 steps do not explain <ligand>.sd
Usage:Segmentation fault !?
Tutorials Docking in 3 steps do not explain dock.prm
Segmentation fault in Linux virtualbox
I used this script to build it from source: http://www.incenp.org/dvlpt/slackbuilds/xap/pymol/pymol.SlackBuild...
pymol 1.7.0.0 fails to run without export PYMOL_PATH='/usr/share/pymol'