Bookdown

R Markdown documents are fully reproducible. Use a productive notebook interface to weave together narrative text and code to produce elegantly formatted output. Use multiple languages including R, Python, and SQL. R Markdown supports dozens of static and dynamic output formats including HTML, PDF, MS Word, Beamer, HTML5 slides, Tufte-style handouts, books, dashboards, shiny applications, scientific articles, websites, and more. R Markdown provides an authoring framework for data science. You can use a single R Markdown file to both. When you open the file in the RStudio IDE, it becomes a notebook interface for R. You can run each code chunk by clicking the icon. RStudio executes the code and display the results inline with your file.

Quiver is a notebook built for programmers. It lets you easily mix text, code, Markdown and LaTeX within one note, edit code with an awesome code editor, live preview Markdown and LaTeX, and find any note instantly via the full-text search. A note in Quiver is comprised of cells, snippets of text, code, Markdown, LaTeX (via MathJax) or diagrams (sequence diagram, flowchart). You can freely mix different cell types within one note. You can set different languages for different code cells, too. The programmer's notebook should make code editing effortless. Quiver packs the awesome ACE code editor in code cells, with syntax highlighting support for more than 120 languages, over 20 themes, automatic indent and outdent, and much more. Quiver lets you write in Markdown with inline formatting and custom CSS options. A live preview window renders Markdown as you type. Quiver uses MathJax to typeset mathematical equations written in LaTeX.