Loupe Browser10x Genomics
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Related Products
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About
Loupe Browser is a powerful visualization software that provides the intuitive functionality you need to explore and analyze your 10x Genomics Chromium and Visium data. You can also convert your Seurat objects into Loupe Browser files using the LoupeR package. The navigation and interactive functionality of the Loupe Browser interface uses a lung squamous cell carcinoma dataset. The workspace is centered around the view panel in which single points representing cell barcodes are shown in a variety of projections. Each point represents a single barcode, the vast majority of which correspond to a single cell. The default projection is the t-SNE plot created by the cell ranger pipeline, though other projections are available. You can drag the mouse over the cells to reposition the plot and use the mouse wheel or trackpad to zoom in and out. Cluster labels appear as you move your mouse over the plot, which is useful for data that has a high number of precomputed clusters.
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About
Generate greater return on research and improve team productivity. Extend private and public data across teams with interactive data visualization. Rosalind is the only multi-tenant SaaS platform designed for scientists. Analyze, interpret, share, plan, validate, and generate new hypotheses. Code-free visualization, AI-powered interpretation, best-in-class collaboration. Scientists of every skill level can benefit from ROSALIND since no programming or bioinformatics skills are required. With powerful downstream analysis and collaboration, ROSALIND is a discovery platform and data hub connecting experiment design, quality control, and pathway exploration. ROSALIND automatically manages tens of thousands of compute cores and petabytes of storage to dynamically scale up and down for every experiment to deliver results. Instantly share results with other scientists across the globe with audit tracking so everyone can focus on the interpretation, not the processing.
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Platforms Supported
Windows
Supported
Mac
Supported
Linux
Supported
Cloud
Not Supported
On-Premises
Not Supported
iPhone
Not Supported
iPad
Not Supported
Android
Not Supported
Chromebook
Not Supported
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Platforms Supported
Windows
Not Supported
Mac
Not Supported
Linux
Not Supported
Cloud
Supported
On-Premises
Not Supported
iPhone
Not Supported
iPad
Not Supported
Android
Not Supported
Chromebook
Not Supported
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Audience
Labs interested in a solution to manage, analyze, and visualize their research data
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Audience
Academic researchers wanting a solution to analyze, interpret, share, and validate data
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Support
Phone Support
Supported
24/7 Live Support
Not Supported
Online
Supported
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Support
Phone Support
Not Supported
24/7 Live Support
Not Supported
Online
Supported
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API
Offers API
Not Supported
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API
Offers API
Not Supported
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Screenshots and Videos |
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Pricing
No information available.
Free Version
Not Supported
Free Trial
Not Supported
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Pricing
$3,250 per month
Free Version
Not Supported
Free Trial
Supported
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Reviews/
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Reviews/
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Training
Documentation
Supported
Webinars
Not Supported
Live Online
Not Supported
In Person
Supported
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Training
Documentation
Supported
Webinars
Not Supported
Live Online
Not Supported
In Person
Not Supported
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Company Information10x Genomics
Founded: 2012
United States
www.10xgenomics.com/support/software/loupe-browser/latest
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Company InformationROSALIND
Founded: 2013
United States
www.rosalind.bio/
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Integrations
No info available.
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Integrations
No info available.
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