Loupe Browser10x Genomics
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Photo51Fearless League
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Related Products
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About
Loupe Browser is a powerful visualization software that provides the intuitive functionality you need to explore and analyze your 10x Genomics Chromium and Visium data. You can also convert your Seurat objects into Loupe Browser files using the LoupeR package. The navigation and interactive functionality of the Loupe Browser interface uses a lung squamous cell carcinoma dataset. The workspace is centered around the view panel in which single points representing cell barcodes are shown in a variety of projections. Each point represents a single barcode, the vast majority of which correspond to a single cell. The default projection is the t-SNE plot created by the cell ranger pipeline, though other projections are available. You can drag the mouse over the cells to reposition the plot and use the mouse wheel or trackpad to zoom in and out. Cluster labels appear as you move your mouse over the plot, which is useful for data that has a high number of precomputed clusters.
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About
Photo51 is a web-based molecular biology suite for designing and analyzing DNA and protein sequences. It supports plasmid design, automated feature annotation, virtual cloning, PCR primer design and virtual agarose gel electrophoresis. Researchers can import sequence files and use an integrated genome browser to explore reference genomes, inspect gene views and export sequences into projects. Additional tools include guide RNA design with PAM visualization, pairwise and multiple sequence alignment, Sanger chromatogram viewing, protein alignment and reverse translation. Photo51 also provides shared team workspaces and version history for collaborative projects. Its open-access genome browser supports genome exploration, while subscriptions provide additional editing and analysis features. It is aimed at researchers, educators and biotechnology teams working with molecular biology workflows.
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Platforms Supported
Windows
Supported
Mac
Supported
Linux
Supported
Cloud
Not Supported
On-Premises
Not Supported
iPhone
Not Supported
iPad
Not Supported
Android
Not Supported
Chromebook
Not Supported
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Platforms Supported
Windows
Supported
Mac
Supported
Linux
Not Supported
Cloud
Supported
On-Premises
Not Supported
iPhone
Not Supported
iPad
Not Supported
Android
Not Supported
Chromebook
Not Supported
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Audience
Labs interested in a solution to manage, analyze, and visualize their research data
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Audience
For researchers, educators and biotech businesses looking for a collaborative molecular biology software suite.
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Support
Phone Support
Supported
24/7 Live Support
Not Supported
Online
Supported
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Support
Phone Support
Not Supported
24/7 Live Support
Not Supported
Online
Supported
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API
Offers API
Not Supported
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API
Offers API
Not Supported
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Screenshots and Videos |
Screenshots and Videos |
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Pricing
No information available.
Free Version
Not Supported
Free Trial
Not Supported
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Pricing
€5/month
Academic access is €5/month; commercial use is €50/month.
Free Version
Supported
Free Trial
Supported
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Reviews/
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Reviews/
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Training
Documentation
Supported
Webinars
Not Supported
Live Online
Not Supported
In Person
Supported
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Training
Documentation
Supported
Webinars
Not Supported
Live Online
Supported
In Person
Supported
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Company Information10x Genomics
Founded: 2012
United States
www.10xgenomics.com/support/software/loupe-browser/latest
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Company InformationFearless League
Founded: 2023
Netherlands
fearlessleague.com
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Categories |
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Integrations
No info available.
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Integrations
No info available.
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