Genome Analysis Toolkit (GATK)Broad Institute
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Photo51Fearless League
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Related Products
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About
Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. The GATK is the industry standard for identifying SNPs and indels in germline DNA and RNAseq data. Its scope is now expanding to include somatic short variant calling and to tackle copy number (CNV) and structural variation (SV). In addition to the variant callers themselves, the GATK also includes many utilities to perform related tasks such as processing and quality control of high-throughput sequencing data and bundles the popular Picard toolkit. These tools were primarily designed to process exomes and whole genomes generated with Illumina sequencing technology, but they can be adapted to handle a variety of other technologies and experimental designs.
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About
Photo51 is a web-based molecular biology suite for designing and analyzing DNA and protein sequences. It supports plasmid design, automated feature annotation, virtual cloning, PCR primer design and virtual agarose gel electrophoresis. Researchers can import sequence files and use an integrated genome browser to explore reference genomes, inspect gene views and export sequences into projects. Additional tools include guide RNA design with PAM visualization, pairwise and multiple sequence alignment, Sanger chromatogram viewing, protein alignment and reverse translation. Photo51 also provides shared team workspaces and version history for collaborative projects. Its open-access genome browser supports genome exploration, while subscriptions provide additional editing and analysis features. It is aimed at researchers, educators and biotechnology teams working with molecular biology workflows.
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Platforms Supported
Windows
Supported
Mac
Supported
Linux
Supported
Cloud
Supported
On-Premises
Not Supported
iPhone
Not Supported
iPad
Not Supported
Android
Not Supported
Chromebook
Not Supported
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Platforms Supported
Windows
Supported
Mac
Supported
Linux
Not Supported
Cloud
Supported
On-Premises
Not Supported
iPhone
Not Supported
iPad
Not Supported
Android
Not Supported
Chromebook
Not Supported
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Audience
Researchers wanting a solution to analyze, manage, and handle genome data
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Audience
For researchers, educators and biotech businesses looking for a collaborative molecular biology software suite.
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Support
Phone Support
Not Supported
24/7 Live Support
Not Supported
Online
Supported
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Support
Phone Support
Not Supported
24/7 Live Support
Not Supported
Online
Supported
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API
Offers API
Not Supported
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API
Offers API
Not Supported
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Screenshots and Videos |
Screenshots and Videos |
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Pricing
Free
Free Version
Supported
Free Trial
Not Supported
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Pricing
€5/month
Academic access is €5/month; commercial use is €50/month.
Free Version
Supported
Free Trial
Supported
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Reviews/
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Reviews/
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Training
Documentation
Supported
Webinars
Supported
Live Online
Not Supported
In Person
Not Supported
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Training
Documentation
Supported
Webinars
Not Supported
Live Online
Supported
In Person
Supported
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Company InformationBroad Institute
United States
gatk.broadinstitute.org/hc/
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Company InformationFearless League
Founded: 2023
Netherlands
fearlessleague.com
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Categories |
Categories |
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Integrations
Docker
Not Supported
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