LigPlot+

LigPlot+

EMBL-EBI
+
+

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About

Bokeh makes it simple to create common plots, but also can handle custom or specialized use-cases. Plots, dashboards, and apps can be published in web pages or Jupyter notebooks. Python has an incredible ecosystem of powerful analytics tools: NumPy, Scipy, Pandas, Dask, Scikit-Learn, OpenCV, and more. With a wide array of widgets, plot tools, and UI events that can trigger real Python callbacks, the Bokeh server is the bridge that lets you connect these tools to rich, interactive visualizations in the browser. Microscopium is a project maintained by researchers at Monash University. It allows researchers to discover new gene or drug functions by exploring large image datasets with Bokeh’s interactive tools. Panel is a tool for polished data presentation that utilizes the Bokeh server. It is created and supported by Anaconda. Panel makes it simple to create custom interactive web apps and dashboards by connecting user-defined widgets to plots, images, tables, or text.

About

LigPlot+ is a successor to our original LIGPLOT program for the automatic generation of 2D ligand-protein interaction diagrams. It is run from an intuitive java interface that allows on-screen editing of the plots via mouse click-and-drag operations. In addition to the new interface, the program includes several major enhancements over the old version. When two or more ligand-protein complexes are sufficiently similar, LigPlot+ can automatically display their interaction diagrams either superposed or side by side. Any conserved interactions are highlighted. The LigPlot+ suite also now includes an update of the original DIMPLOT program for plotting protein-protein or domain-domain interactions. Users can flexibly select the interface of interest and DIMPLOT will then generate a diagram showing the residue-residue interactions across the interface. To assist in interpretation, the residues in one of the interfaces can be optionally displayed in sequence order.

Platforms Supported

Windows
Mac
Linux
Cloud
On-Premises
iPhone
iPad
Android
Chromebook

Platforms Supported

Windows
Mac
Linux
Cloud
On-Premises
iPhone
iPad
Android
Chromebook

Audience

DevOps teams searching for a visualization library solution

Audience

Labs and researchers interested in a solution to create and visualize ligand-protein interaction diagrams

Support

Phone Support
24/7 Live Support
Online

Support

Phone Support
24/7 Live Support
Online

API

Offers API

API

Offers API

Screenshots and Videos

Screenshots and Videos

Pricing

Free
Free Version
Free Trial

Pricing

No information available.
Free Version
Free Trial

Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

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Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

This software hasn't been reviewed yet. Be the first to provide a review:

Review this Software

Training

Documentation
Webinars
Live Online
In Person

Training

Documentation
Webinars
Live Online
In Person

Company Information

Bokeh
bokeh.org

Company Information

EMBL-EBI
United Kingdom
www.ebi.ac.uk/thornton-srv/software/LigPlus/

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Categories

Categories

Integrations

Google Maps
JavaScript
Python

Integrations

Google Maps
JavaScript
Python
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