VividSTORM is a free and open-source standalone software with graphical user interface, for the correlated visualization and analysis of superresolution single molecule localization microscopy (SMLM) molecule lists and conventional pixel intensity-based images.
The localization points (LPs) within this ROI can be analyzed using the selected built-in functions.

NOTE: If you encounter issues not addressed by the user guide, please contact by message on this site or via e-mail for additional support: vividstorm[at]koki.mta.hu

If you find our software useful in your project, please cite:
Correlated confocal and super-resolution imaging by VividSTORM
Nature Protocols 11, 163–183 (2016)
doi:10.1038/nprot.2016.002

Features

  • Filtering of SMLM coordinates
  • Manual and automatic (MACWE) ROI selection
  • Measurement of molecular abundance
  • DBSCAN clustering on SMLM data
  • Internalization index calculation
  • Intermolecualr (Euclidean and surface) distances
  • Surface density measurements

Project Samples

Project Activity

See All Activity >

License

GNU General Public License version 3.0 (GPLv3)

Follow VividSTORM

VividSTORM Web Site

You Might Also Like
SysAid multi-layered ITSM solution Icon
SysAid multi-layered ITSM solution

For organizations spanning all industries and sizes from SMBs to Fortune 500 corporations

SysAid is an ITSM, Service Desk and Help Desk software solution that integrates all of the essential IT tools into one product. Its rich set of features include a powerful Help Desk, IT Asset Management, and other easy-to-use tools for analyzing and optimizing IT performance.
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of VividSTORM!

Additional Project Details

Operating Systems

Linux, Windows

Intended Audience

Science/Research, Advanced End Users

User Interface

Qt

Programming Language

Python

Related Categories

Python Data Visualization Software

Registered

2015-10-10