SSC is a tool for predicting sgRNA efficiency from spacer sequences. It supports the applications of optimizing sgRNA libraries in CRISPR/Cas9 knockout or CRISPR/dCas9 inhibition/activation screens.

Features

  • Extracting candidate spacer sequences from .fasta file
  • Predict sgRNA efficiency from the spacer sequences, for library design in CRISPR/Cas9 knockout and CRISPR/dCas9 inhibition or activation.
  • provide matrices that supports: 19-20 bps spacers in CRISPR/Cas9 knockout, optimized for human and mouse genome.
  • provide matrices that supports: 19-21 bps spacers in CRISPR/dCas9, optimized for human genome.

Project Activity

See All Activity >

Follow SSC

SSC Web Site

Other Useful Business Software
$300 in Free Credit Towards Top Cloud Services Icon
$300 in Free Credit Towards Top Cloud Services

Build VMs, containers, AI, databases, storage—all in one place.

Start your project in minutes. After credits run out, 20+ products include free monthly usage. Only pay when you're ready to scale.
Get Started
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of SSC!

Additional Project Details

Registered

2014-10-10
Report inappropriate content