Download
SNPTools is a suite of tools that enables integrative SNP analysis in next generation sequencing data with large cohorts. It not only calls SNP in a population with high sensitivity and accuracy, but also employs a novel imputation engine to achieve highly accurate genotype calling and phasing in an efficient way.
Categories
Bio-InformaticsLicense
BSD License, MIT LicenseFollow SNPTools
Other Useful Business Software
Gen AI apps are built with MongoDB Atlas
MongoDB Atlas is the developer-friendly database used to build, scale, and run gen AI and LLM-powered apps—without needing a separate vector database. Atlas offers built-in vector search, global availability across 115+ regions, and flexible document modeling. Start building AI apps faster, all in one place.
Rate This Project
Login To Rate This Project
User Reviews
-
Thanks for Snptools, it's excellent!
-
Hey. My output of pileup are C2.sorted.bam.edb and C6.sorted.bam.edb The version of reference is Saccharomyces cerevisiae EF4.66 The list file is /home/bo/program/snptools/C2.sorted.bam.ebd /home/bo/program/snptools/C6.sorted.bam.ebd The command line about varisite is ./varisite list.txt chr /media/6729f29b-428d-4980-9c8a-eb9613fc2cfb/yeast-linux-reference.fa The fault information is binding 2 groups 1 loading /media/6729f29b-428d-4980-9c8a-eb9613fc2cfb/yeast-linux-reference.fa fail to read /home/bo/program/snptools/C2.sorted.bam.ebd fail to read /home/bo/program/snptools/C6.sorted.bam.ebd Segmentation fault