Systems Biology Markup Language (SBML) Files

libSBML 5.19.0 installers for 32-bit Linux operating systems

Important: Before you install libSBML using these installers, please uninstall any existing copy of libSBML located in the same destination on your computer, or you may end up with mixed versions of different libSBML components on your system.

C, C++, C#, Java, Perl and Ruby installers

This directory contains installers for precompiled versions of libSBML 5.19.0 for 32-bit Linux systems. They were built with the http://www.xmlsoft.org parser library, and include accepted SBML Level 3 packages plus interfaces for the following programming languages:

• C
• C++
• C# (Mono)
• Java
• Perl
• Ruby

Files include:

• libSBML-5.19.0-Linux-x86.rpm -- for RPM-based Linux distributions (Fedora, Red Hat, CentOS)
• libSBML-5.19.0-Linux-x86.deb -- for Debian-based Linux distributions (Ubuntu & variants, Debian)
• libSBML-5.19.0-Linux-x86-binaries-centos.tar.gz -- an archive containing just the binary files built for CentOS
• libSBML-5.19.0-Linux-x86-binaries-ubuntu.tar.gz -- an archive containing just the binary files built for Ubuntu

By default, the installer will put libSBML into /usr. Detailed information about how to make libSBML accessible to your software is available on a separate web page.

MATLAB interface

The main directory named "MATLAB interface" contains the standalone binaries for the MATLAB libSBML interface only. This is not included in the main installers.

R source package

A source package for the libSBML R interface is available here. This is not included in the main installers.

Python installers

If you are primarily interested in Python, we provide three options for installing libSBML for Python:

• Using PiPI: You can use the following command to install libSBML for Python: sudo pip install python-libsbml

• Using conda: You can install libSBML from the Anaconda Cloud: conda install -c SBMLTeam python-libsbml

• Using apt-get or yum: Python installers for use with apt-get or yum for various Linux distributions can be obtained from the Open Build Service.

After you have installed the Python libSBML library, follow the instructions for how to access libSBML.

Javascript/PHP interfaces

We do provide support for these languages but it will be necessary to build them for your system (see Additional information below).

Additional information

If you need to use a different XML parser library, it will be necessary to build libSBML yourself from the source distribution using suitable configuration flags. The procedure is described in the libSBML documentation. The source and documentation are available from the top-level download directory, http://sourceforge.net/projects/sbml/files/libsbml/5.19.0.

For additional information about this version of libSBML, please see the documentation or visit the libSBML website.

Please report problems using our tracker: http://sbml.org/Software/libSBML/issue-tracker

Thank you for your interest in libSBML!

The LibSBML Team.