JAligner

JAligner is an open source Java implementation of the dynamic programming algorithm Smith-Waterman with Gotoh's improvement for biological local pairwise sequence alignment with the affine gap penalty model.

Project Samples

Project Activity

See All Activity >

License

BSD License, GNU General Public License version 2.0 (GPLv2)

Follow JAligner

JAligner Web Site

Other Useful Business Software

Your top-rated shield against malware and online scams | Avast Free Antivirus

Browse and email in peace, supported by clever AI

Our antivirus software scans for security and performance issues and helps you to fix them instantly. It also protects you in real time by analyzing unknown files before they reach your desktop PC or laptop — all for free.

Free Download

Rate This Project

User Reviews

Be the first to post a review of JAligner!

Additional Project Details

Languages

English

Intended Audience

Science/Research, Developers

Programming Language

C#, Java

Related Categories

C# Bio-Informatics Software, Java Bio-Informatics Software

Registered

2003-08-20

Similar Business Software

Bioconductor

The Bioconductor project aims to develop and share open source software for precise and repeatable analysis of biological data. We foster an inclusive and collaborative community of developers and data scientists. Resources to maximize the potential of Bioconductor. From basic functionalities to...

See Software
Evo Designer

Evo Designer is an advanced tool developed by the Arc Institute, leveraging the capabilities of the Evo 2 genomic foundation model to facilitate DNA sequence generation and analysis. This platform enables users to input nucleotide sequences or specify organisms, prompting the model to generate...

See Software
Partek Flow

Partek bioinformatics software delivers powerful statistical and visualization tools in an easy-to-use interface. Researchers of all skill levels are empowered to explore genomic data quicker and easier than ever before. We turn data into discovery®. Pre-installed workflows and pipelines in our...

See Software