IQuant

IQuant is an automated pipeline for quantitative proteomics based upon isobaric tags. It integrates post-processing tool of protein identification and advanced statistical algorithms to process the MS/MS signals generated from the peptides labeled by isobaric tags for quantification. IQuant can run from a graphical user interface (GUI) as well as a command-line interface and work with both Windows and Linux system. This website contains the IQuant software, an example data labeled by iTRAQ-8plex for testing and a user's manual. If you have any question about IQuant, please contact me: wenbo@genomics.cn.

The source code of IQuant can be found here "https://sourceforge.net/p/iquant/code/".

Features

Support iTRAQ-8plex, iTRAQ-4plex and TMT-6plex labeling data
Run from a graphical user interface (GUI) as well as a command-line interface
Work with both Windows and Linux system
Support identification result from Mascot or other search engines with mzIdentML format
Provide a GUI for viewing result interactively

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License

GNU General Public License version 2.0 (GPLv2)

Follow IQuant

IQuant Web Site

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wenbostar Posted 2014-05-20

IQuant is well designed for isobaric tags labeling data analysis.

Additional Project Details

Operating Systems

Linux, Windows

User Interface

Java Swing

Programming Language

Java, S/R

Related Categories

Java Molecular Science Software, Java Chemistry Software, Java Bio-Informatics Software, S/R Molecular Science Software, S/R Chemistry Software, S/R Bio-Informatics Software

Registered

2013-08-20

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