Executable program that measures sizes and other properties of colonies arrayed in a grid format (intended for 768, 384, or 96 colonies on agar plates) from jpeg images

Project Samples

A masked image after automatic analysis. A piece of a typical results data file. The main program window, with the grid menu open. The main program window, with the file menu open.

Project Activity

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Categories

Bio-Informatics, Information Analysis

License

GNU General Public License version 2.0 (GPLv2)

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  • devking17 Posted 2012-12-06
    Very easy to use to determine colony sizes from raw EMAP images for use with the freely available EMAP toolbox. Simply direct the program to process a folder of .jpgs and it will output data matrices for use with the matlab toolbox. Additionally, the program generates a list of potentially incorrect files which you can inspect and then manually re-process any of the individual images.
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Additional Project Details

Languages

English

Intended Audience

End Users/Desktop

User Interface

Java Swing

Programming Language

Java

Related Categories

Java Bio-Informatics Software, Java Information Analysis Software

Registered

2006-03-29
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