GPDE download | SourceForge.net

The GPDE is a biological protein database based on the PRIDE xml format. It combines proteomics experiments based on the investigated cell type and creates a biological meta-analysis. Try it out at http://www.meduniwien.ac.at/proteomics/database.

Features

Biological proteomics database
Biological based meta-analysis of proteomics experiments
Easy biomarker evaluation
Fast proteomics experiments interpretation

Project Samples

Data Comparison - select cells for pool B

Data Comparison - select data for pool A

Project Activity

See All Activity >

License

Affero GNU Public License

Follow GPDE

GPDE Web Site

Other Useful Business Software

Go From AI Idea to AI App Fast

One platform to build, fine-tune, and deploy ML models. No MLOps team required.

Access Gemini 3 and 200+ models. Build chatbots, agents, or custom models with built-in monitoring and scaling.

Try Free

Rate This Project

User Reviews

Be the first to post a review of GPDE!

Additional Project Details

Languages

English

Intended Audience

Healthcare Industry, Science/Research

User Interface

Web-based

Programming Language

JavaScript, PHP

Database Environment

SQL-based

Related Categories

PHP Bio-Informatics Software, JavaScript Bio-Informatics Software

Registered

2009-08-31

Similar Business Software

OmnibusX

In the world of biological data science, navigating vast and complex datasets can be a daunting task. Our software toolkit is designed to empower you by accelerating analysis, promoting accessibility, and providing comprehensive visualization tools to help you make sense of these intricate...

See Software
BioTuring Browser

Explore hundreds of curated single-cell transcriptome datasets, along with your own data, through interactive visualizations and analytics. The software also supports multimodal omics, CITE-seq, TCR-seq, and spatial transcriptomic. Interactively explore the world's largest single-cell expression...

See Software
Pluto

Since its founding in 2021 from the Wyss Institute at Harvard University, Pluto has become a trusted partner of life sciences organizations around the country ranging from biotech start-ups to public biopharma companies. Our cloud-based platform gives scientists the ability to manage all of...

See Software
Geneious

Geneious Prime makes bioinformatics accessible by transforming raw data into visualizations that make sequence analysis intuitive and user-friendly. Simple sequence assembly and easy editing of contigs. Automatic annotation for gene prediction, motifs, translation, and variant calling. Genotype...

See Software
OmicsBox

OmicsBox is a leading bioinformatics solution that offers end-to-end data analysis of genomes, transcriptomes, metagenomes, and genetic variation studies. The application is used by top private and public research institutions worldwide and allows researchers to easily process large and complex...

See Software
Nygen

Nygen is a cloud-based single-cell RNA-seq (scRNA-seq) and multi-omics data analysis and discovery platform designed to let researchers upload, explore, visualize, analyze and interpret complex cellular datasets with an intuitive, no-code interface that supports drag-and-drop workflows and...

See Software