GenomeView is a genome browser and annotation editor that displays reference sequence, annotation, multiple alignments, short read alignments and graphs. Most major data formats are supported. Local and internet files can be loaded.
This project has moved to GitHub: https://github.com/GenomeView/genomeview

Features

  • Genome browser
  • Short read alignment visualization
  • Multiple alignment viewer
  • Comparative genomics
  • NGS (Next Generation Sequencing) viewer
  • Annotation editor
  • Easy integration with existing websites and data platforms
  • Authentication and encryption

Project Samples

Detailed multiple alignment and some gene annotation Short read alignments to C. elegans chr I from 3 experiments C. elegans nucleotide scale short read alignment Nucleotide level zoom, with multiple alignment sequence logo Synteny with 14 organisms for a complete bacterial genome

Project Activity

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Categories

Bio-Informatics

License

GNU General Public License version 2.0 (GPLv2)

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GenomeView Web Site

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Additional Project Details

Languages

English

Intended Audience

Science/Research, End Users/Desktop

User Interface

Java Swing

Programming Language

Java

Related Categories

Java Bio-Informatics Software

Registered

2007-10-17
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