A project made by Khalid Bashir. It's simple linux program which evaultes the genome assembly with high speed and accuracy.
Please read instuctions.md

[Options]
Argument 1 -> Name of the input fasta/fastaq file
Argument 2 -> Sequence Limit (optional)(Default: 999999999)
Argument 3 -> Usable scaffold length (optional)(Default: 2500)
Argument 4 -> Number of Nucliotide to spit into contigs (optional)(Default: 25)
Argument 5 -> Genome size (optional)

Project Samples

Example of bacteria genome

Project Activity

See All Activity >

Follow gengen

gengen Web Site

Other Useful Business Software
MongoDB Atlas runs apps anywhere Icon
MongoDB Atlas runs apps anywhere

Deploy in 115+ regions with the modern database for every enterprise.

MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
Start Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of gengen!

Additional Project Details

Registered

2017-04-17
Report inappropriate content