GAAS download | SourceForge.net

GAAS (Genome relative Abundance and Average Size) is a bioinformatic tool to calculate accurate community composition and average genome size in metagenomes by using BLAST, advanced parsing of hits and correction of genome length bias.

Features

FASTA as input, graphs as output
Normalization by genome length
Weighting of similarities
Statistical intervals of confidence

Project Samples

Convergence of the bootstrapped estimates

Project Activity

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License

GNU General Public License version 2.0 (GPLv2)

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Additional Project Details

Intended Audience

Science/Research

User Interface

Console/Terminal

Programming Language

Perl

Related Categories

Perl Bio-Informatics Software

Registered

2008-11-03

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