FindPlasmids identifies known plasmids in genome assembly files by using the assembly file to query a local Blast+ database of plasmid sequences.
The FindPlasmids package includes executables for Mac OS X, Linux and Windows.
Detailed instructions for making the local plasmid database, searching it, and identifying the plasmids are included in the FindPlasmids package.
Follow FindPlasmids
Other Useful Business Software
Gen AI apps are built with MongoDB Atlas
MongoDB Atlas is the developer-friendly database used to build, scale, and run gen AI and LLM-powered apps—without needing a separate vector database. Atlas offers built-in vector search, global availability across 115+ regions, and flexible document modeling. Start building AI apps faster, all in one place.
Rate This Project
Login To Rate This Project
User Reviews
Be the first to post a review of FindPlasmids!