FindPlasmids

Find plasmids in microbial genome assembly files

Brought to you by: barryghall

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Last Update: 2024-03-08

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FindPlasmids identifies known plasmids in genome assembly files by using the assembly file to query a local Blast+ database of plasmid sequences.

The FindPlasmids package includes executables for Mac OS X, Linux and Windows.

Detailed instructions for making the local plasmid database, searching it, and identifying the plasmids are included in the FindPlasmids package.

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2018-03-19

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Train ML Models With SQL You Already Know

BigQuery automates data prep, analysis, and predictions with built-in AI assistance.

Build and deploy ML models using familiar SQL. Automate data prep with built-in Gemini. Query 1 TB and store 10 GB free monthly.

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