exome-filter

Brought to you by: ccpan

Last Update: 2021-02-09

Get an email when there's a new version of exome-filter

A script to filter exome-seq by 1000G, ExAc, dbSNP with minimal coverage and T/N ratio.
The script uses the files produced by exome_test.sh.
An error is corrected.
The script also produces MAF file that only includes variants detected by BOTH GATK and Varscan.
A few errors are corrected.

Project Activity

See All Activity >

Follow exome-filter

exome-filter Web Site

Other Useful Business Software

Veeam Data Platform v13.1

Move workloads across hypervisors and clouds with no vendor lock-in. Try VDP free today.

Try Veeam Data Platform today. Experience the unified platform that's secure by design, portable by default, and proven to recover clean, fast, and anywhere.

Try Now

Rate This Project

User Reviews

Be the first to post a review of exome-filter!

Additional Project Details

Registered

2017-09-11

Report inappropriate content

$300 Free Credits to Build on Google Cloud

New customers can spin up VMs, build with AI, and query data at no cost.

Put your $300 in credit toward real workloads, then keep building with free monthly usage for 20+ products. No commitment and no charge until you upgrade.

Start Free

Recommended Projects

umlaute
This script corrects vowel mutation (Umlaut) errors in filenames
bootf2BCA
computing f2 bootstrap CI BCA
Pc Calculator
Pc Calculator is a clever note and formula editor combined with an advanced and strong scientific calculator. Being an editor it is extremely user-friendly allowing all possible typing and other errors to be easily corrected and fast recalculated.
MeshFix
Converts a raw digitized polygon mesh to a clean mesh where all the occurrences of a specific set of "defects" are corrected. Holes, self-intersections, degenerate and non-manifold elements are all replaced with valid configurations.
SPLITREAD
Detection of structural variants and indels from Genome/Exome sequencing data