> CStone wiki: https://sourceforge.net/p/cstone/wiki/Home/
Related Software:
1. CStone: (See wiki)
2. CSReadGen: https://sourceforge.net/projects/csreadgen/
3. CView: https://sourceforge.net/projects/cview/
4. ChimSim: https://sourceforge.net/projects/chimsim/
5. TVScript: https://sourceforge.net/projects/tvscript/
6. SeQuester: https://sourceforge.net/projects/sequester/
7. TreeScope: https://sourceforge.net/projects/treescope/
Features
- De novo assembly of RNA-Seq data.
- Identification of non-chimeric contigs.
- Cross-platform compatibility.
- Executable jar available.
- No external packages required.
- Code easy to follow and incorporated to other tools.
- Information on complexity of underlying gene families.
- de Bruijn like approach.
Categories
Bio-InformaticsFollow CStone
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