CStone

> CStone wiki: https://sourceforge.net/p/cstone/wiki/Home/

Related Software:
1. CStone: (See wiki)
2. CSReadGen: https://sourceforge.net/projects/csreadgen/
3. CView: https://sourceforge.net/projects/cview/
4. ChimSim: https://sourceforge.net/projects/chimsim/
5. TVScript: https://sourceforge.net/projects/tvscript/
6. SeQuester: https://sourceforge.net/projects/sequester/
7. TreeScope: https://sourceforge.net/projects/treescope/

Features

De novo assembly of RNA-Seq data.
Identification of non-chimeric contigs.
Cross-platform compatibility.
Executable jar available.
No external packages required.
Code easy to follow and incorporated to other tools.
Information on complexity of underlying gene families.
de Bruijn like approach.

Project Samples

Project Activity

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