Automated Proteomics Pipeline Files

A front end for several popular open source proteomics tools

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Name	Modified	Size
exercise4.zip	2015-01-15	44.8 MB
exercize3.zip	2015-01-15	23.1 MB
exercize1.zip	2015-01-15	32.2 MB
APPInterface.zip	2015-01-15	4.5 MB
APPServer.zip	2014-10-25	14.3 MB
UserManual.pdf	2014-10-25	2.6 MB
APPLinux64bitBundle.tar.gz	2014-10-25	663.0 MB
APPWin32bitBundle.zip	2014-10-25	175.0 MB
APPSource.zip	2014-07-31	58.7 MB
licenseLetterDependencies.odt	2014-07-04	29.5 kB
APPTutorialData.zip	2014-07-04	54.4 MB
Totals: 11 Items		1.1 GB

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Recommended Projects

SASHIMI
The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
proteomics
proteomics utilities
Abacus
A tool for extracting and preprocessing spectral count data for label-free quantitative proteomic analysis. This program is designed to be used with the Trans-Proteomic Pipeline (TPP).
PeptideProphet
Attn: the latest version of PeptideProphet must be obtained as part of the Trans-Proteomic Pipeline package at http://sourceforge.net/projects/sashimi/.
Proteomics Standards Initiative
The Proteomics Standards Initiative (PSI) aims to define community standards for data representation in proteomics to facilitate data comparision, exchange and verification.

Automated Proteomics Pipeline Files

A front end for several popular open source proteomics tools

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