ArchTEx Files

Accurate Extraction and Visualization of Next-Generation Sequence data

Brought to you by: jebard, wklai2

The interactive file manager requires Javascript. Please enable it or use sftp or scp.
You may still browse the files here.

Name	Modified	Size	InfoDownloads / Week
Parent folder
K562_H3K4me3.bam	2012-01-03	1.0 GB	0
K562_H3K4me3.bam.bai	2012-01-03	6.2 MB	0
Cerevisiae_ALL_TSS.Gen	2012-01-03	119.0 kB	0
Human_TSS.Gen	2012-01-03	746.5 kB	0
refGene-hg19.txt	2012-01-03	11.0 MB	0
illumina_human_genes.gtf	2012-01-03	68.4 MB	0
Cerevisiae_EX3_Mono.sorted.bam	2012-01-03	727.3 MB	0
Cerevisiae_EX3_Mono.sorted.bam.bai	2012-01-03	36.5 kB	0
Totals: 8 Items		1.9 GB	0

Other Useful Business Software

Gen AI apps are built with MongoDB Atlas

Build gen AI apps with an all-in-one modern database: MongoDB Atlas

MongoDB Atlas provides built-in vector search and a flexible document model so developers can build, scale, and run gen AI apps without stitching together multiple databases. From LLM integration to semantic search, Atlas simplifies your AI architecture—and it’s free to get started.

Start Free

Our Free Plans just got better! | Auth0

With up to 25k MAUs and unlimited Okta connections, our Free Plan lets you focus on what you do best—building great apps.

You asked, we delivered! Auth0 is excited to expand our Free and Paid plans to include more options so you can focus on building, deploying, and scaling applications without having to worry about your security. Auth0 now, thank yourself later.

Try free now

Recommended Projects

DeNovoCheck
DeNovoCheck: Inheritance analysis for NGS trio data
miRDP2
Accurately and fast analyzing microRNAs transcriptome in plants
HomSI
Homozygous Stretch Identifier from next-generation sequencing data
inGAP-family
inGAP-family provides an efficient and effective framework to discover, filter and visualize DNA polymorphisms and structural variants from alignment of short reads. Applying this method on polymorphism detection on real datasets shows that elimination of artificial variants greatly facilitates the precise identification of meiotic recombination points, recognizing causal mutations in mutant genomes or QTL loci. In addition, inGAP-family provides user-friendly graphical interface for detection of polymorphisms and structural variants, and for further evaluation of predicted variants and identification of mutations related to genotypes. inGAP-family is implemented in Java to provide a platform-independent tool, and to support both command line mode and graphical mode. The output could also be visualized in user-friendly graphical interface for checking SNPs, indels and large-scale structural variants.
ExtractThinker
ExtractThinker is a Document Intelligence library for LLMs

ArchTEx Files

Accurate Extraction and Visualization of Next-Generation Sequence data

Get an email when there's a new version of ArchTEx