142 |
Cannot determine type of file '.gkpStore:untrim'. Tried |
Terminator |
open |
|
2016-07-06
|
2016-07-06
|
5 |
|
141 |
sort with multiple thread support to improve performance |
Terminator |
open |
|
2016-07-05
|
2016-07-06
|
3 |
|
140 |
extreme disk usage issue |
Assembly_analysis |
open |
|
2015-05-17
|
2015-05-18
|
5 |
|
139 |
runCA SLURM/DRMAA support |
Assembly_analysis |
open |
|
2015-05-15
|
2015-11-16
|
5 |
|
136 |
Compressed input and output to meryl and merTrim |
None |
open |
|
2012-09-11
|
2012-09-11
|
5 |
|
135 |
Move pacBio correction results to separate subdir(s) |
None |
open |
|
2012-08-21
|
2012-08-21
|
5 |
|
133 |
correctPacBio in 550Mb genome |
Assembly_analysis |
open |
|
2012-01-26
|
2012-01-26
|
5 |
|
130 |
nearly identical sequence in contigs |
Assembly_analysis |
open |
|
2011-10-27
|
2011-10-27
|
5 |
|
129 |
problem solexa assembly |
Assembly_pipeline |
pending |
Jason Miller
|
2011-09-28
|
2011-09-30
|
5 |
|
127 |
Parallel gzip - pigz |
None |
open |
Brian Walenz
|
2010-12-15
|
2011-04-04
|
5 |
|
123 |
Automatic utgErrorLimit for Illumina |
Assembly_pipeline |
open |
Sergey Koren
|
2010-06-09
|
2010-06-09
|
3 |
|
122 |
Incremental addition of new reads. |
Assembly_pipeline |
open |
|
2010-06-02
|
2010-06-02
|
5 |
|
117 |
comparative assembly feature |
Scaffolder |
open |
|
2010-01-14
|
2010-01-14
|
5 |
|
116 |
unitigger is randomly accessing gkpStore |
Unitigger |
open |
|
2009-10-08
|
2009-10-08
|
5 |
|
111 |
sffToCA -discardLinkerPositiveReads |
Gatekeeper |
open |
|
2009-07-02
|
2009-07-02
|
5 |
|
109 |
Mate pair saturation report |
Scaffolder |
open |
|
2009-07-02
|
2009-07-02
|
5 |
|
107 |
overlapStore by number of buckets, not memory |
Overlapper |
open |
|
2009-06-10
|
2009-06-10
|
3 |
|
103 |
Enhance extractmessages |
Assembly_analysis |
open |
|
2009-02-23
|
2009-02-23
|
1 |
|
102 |
require kmer to build |
None |
open |
Brian Walenz
|
2009-02-20
|
2009-02-20
|
7 |
|
100 |
gatekeeper: fragment sampling |
Gatekeeper |
open |
|
2008-12-05
|
2008-12-05
|
5 |
|
99 |
gatekeeper: exclude uid/iid |
Gatekeeper |
open |
|
2008-12-05
|
2008-12-05
|
5 |
|
97 |
add sample spec files |
None |
open |
|
2008-12-04
|
2008-12-04
|
8 |
|
95 |
cgw: coverageStat tuned for 10x |
Scaffolder |
open |
|
2008-12-04
|
2008-12-04
|
5 |
|
92 |
BOG unitig checker |
Unitigger |
open |
Brian Walenz
|
2008-11-18
|
2008-11-18
|
8 |
|
91 |
wiki: document the gatekeeper library features |
Gatekeeper |
open |
Brian Walenz
|
2008-10-10
|
2008-12-04
|
8 |
|