USeq Source Code

Brought to you by: biotelerock, bmilash, elainegee, scourdy, tmosbruger

Commit [r2] Maximize Restore History

Initial commit after reorganizing USeq svn

Authored by: biotelerock 2012-10-31

Browse code at this revision

Parent: [r1]

Child: [r3]

<< < 1 .. 27 28 29 30 31 .. 35 > >> (Page 29 of 35)

added	/trunk/Source/util/bio/parsers/SRAProcessor.java
added	/trunk/Source/util/bio/parsers/ShiftAnnotationPositions.java
added	/trunk/Source/util/bio/parsers/SynonymMatching.java
added	/trunk/Source/util/bio/parsers/UCSCGeneLine.java
added	/trunk/Source/util/bio/parsers/UCSCGeneLineChromComparator.java
added	/trunk/Source/util/bio/parsers/UCSCGeneLineChromStrandComparator.java
added	/trunk/Source/util/bio/parsers/UCSCGeneLineComparatorLog2Ratio.java
added	/trunk/Source/util/bio/parsers/UCSCGeneLineComparatorMaxAbsLog2Ratio.java
added	/trunk/Source/util/bio/parsers/UCSCGeneLineComparatorMaxPValue.java
added	/trunk/Source/util/bio/parsers/UCSCGeneLineComparatorPValue.java
added	/trunk/Source/util/bio/parsers/UCSCGeneLineComparatorScore.java
added	/trunk/Source/util/bio/parsers/UCSCGeneLineComparatorScoreBigToSmall.java
added	/trunk/Source/util/bio/parsers/UCSCGeneModelTableReader.java
added	/trunk/Source/util/bio/parsers/XMerReadBiasParser.java
added	/trunk/Source/util/bio/parsers/gff
added	/trunk/Source/util/bio/parsers/gff/DmelRel4Extractor.java
added	/trunk/Source/util/bio/parsers/gff/ExtractGffFeatures.java
added	/trunk/Source/util/bio/parsers/gff/GadFlyGffExtractor.java
added	/trunk/Source/util/bio/parsers/gff/Gff3Feature.java
added	/trunk/Source/util/bio/parsers/gff/Gff3Parser.java
added	/trunk/Source/util/bio/parsers/gff/GffFeature.java
added	/trunk/Source/util/bio/parsers/gff/GffParser.java
added	/trunk/Source/util/bio/parsers/gff/ParseWormBaseGffToUCSC.java
added	/trunk/Source/util/bio/parsers/gff/package.html
added	/trunk/Source/util/bio/parsers/package.html

/trunk/Source/util/bio/parsers/SRAProcessor.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/ShiftAnnotationPositions.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/SynonymMatching.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/UCSCGeneLine.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/UCSCGeneLineChromComparator.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/UCSCGeneLineChromStrandComparator.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/UCSCGeneLineComparatorLog2Ratio.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/UCSCGeneLineComparatorMaxAbsLog2Ratio.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/UCSCGeneLineComparatorMaxPValue.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/UCSCGeneLineComparatorPValue.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/UCSCGeneLineComparatorScore.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/UCSCGeneLineComparatorScoreBigToSmall.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/UCSCGeneModelTableReader.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/XMerReadBiasParser.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/gff

Directory.

/trunk/Source/util/bio/parsers/gff/DmelRel4Extractor.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/gff/ExtractGffFeatures.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/gff/GadFlyGffExtractor.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/gff/Gff3Feature.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/gff/Gff3Parser.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/gff/GffFeature.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/gff/GffParser.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/gff/ParseWormBaseGffToUCSC.java Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/gff/package.html Diff Switch to side-by-side view

/trunk/Source/util/bio/parsers/package.html Diff Switch to side-by-side view

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