SWAPHI: Smith-Waterman on Intel Xeon Phi download

The first parallel algorithm to accelerate the Smith-Waterman protein database search on shared-host multiple Intel Xeon Phi coprocessors. By searching against the UniProtKB/TrEMBL database, SWAPHI achieves a performance of up to 58.8 billion cell updates per second (GCUPS) on a single Xeon Phi and up to 228.4 GCUPS on four Xeon Phis.

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License

Apache License V2.0, GNU General Public License version 2.0 (GPLv2)

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Additional Project Details

Operating Systems

BSD, Linux

Intended Audience

Education, Engineering, Science/Research

User Interface

.NET/Mono, Console/Terminal

Programming Language

ALGOL 68, C++

Related Categories

C++ Bio-Informatics Software, ALGOL 68 Bio-Informatics Software

Registered

2013-08-10

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