sed-ml-editors — Migrating to google groups: https://groups.google.com/d/forum/sed-ml-editors

Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

[David N. <dav...@gm...>]

Thanks Ion, a zoom link would be great.

On 25 June 2017 at 19:25, Moraru,Ion <mo...@uc...> wrote:
> Unfortunately I will not be coming to Seattle but I can attend remotely.
> Should I set up a Zoom link for 7:30 to 9:30?
>
> Cheers, Ion
>
>
>
> From: Dagmar Waltemath [mailto:dag...@un...]
> Sent: Tuesday, May 23, 2017 12:10 AM
> To: David Nickerson <dav...@gm...>;
> sed...@li...
> Subject: Re: [sed-ml-editors] SED-ML editorial board status and HARMONY
> planning
>
>
>
> 7:30am! That is the real editor spirit :)
>
> Many greets,
> Dagmar
>
>
> Am 23. Mai 2017 00:48:18 MESZ schrieb David Nickerson
> <dav...@gm...>:
>
> Hi all,
>
> Kyle has booked us a room in the Bioengineering building on the
> Wednesday morning at 7:30 and has offered to be there to let us into
> the building :)
>
> Cheers,
> David.
>
>
> On 21 May 2017 at 08:50, David Nickerson <dav...@gm...> wrote:
>
>  Thanks Lucian.
>
>  Wednesday morning is ok for me for the editors meeting, but probably
>  no later. I'm keen to discuss some of the issues around spec writing,
>  where the spec is hosted, etc. and would be good for the editors to
>  get a plan ready and presented at HARMONY for some discussion. I'll
>  see if Kyle can find us a room at UW for the meeting.
>
>  I'll send out the nomination form soon.
>
>  Cheers,
>  David.
>
>
>  On 20 May 2017 at 03:32, Lucian Smith <luc...@gm...> wrote:
>
>  Thanks for getting the nominations started!  I added a non-required
> question
>  to the form for 'why do you think this person would make a good
>  editor'--we've been compiling those answers and including them on the
> voting
>  form for SBML editors in the past.
>
>  Tuesday morning is the same time as the SBML SAB meeting, which I'll be at,
>  but 7:30 in the morning in general is a good time to have a meeting.  Maybe
>  Wednesday?
>
>  -Lucian
>
>  On Thu, May 18, 2017 at 8:45 PM, David Nickerson
> <dav...@gm...>
>  wrote:
>
>
>  Hi all,
>
>  Following up on Lucian's comment that it would be useful to hold the
>  editor election prior to HARMONY so that we can get the new editors
>  quickly on board, I have just set up the nomination form to start the
>  process. If there are no objections, I propose sending this out in the
>  next day or two and then allowing 2 weeks (until June 4) for people to
>  submit nominations. That would give us a few days to contact the
>  nominees followed by the two week voting period and be all done before
>  HARMONY starts. Just :)
>
>  Does that sound like a good plan? I'll wait until at least one or two
>  other editors favourably reply before actually instigating anything.
>
>  For the editors meeting at HARMONY, I propose trying to assemble the
>  current editors and any past editors who can make it (I know Frank
>  will be in Seattle). If there are no preferences otherwise and since
>  there is currently no SED-ML scheduled for the Monday of HARMONY, I'd
>  like to propose holding the editors meeting Tuesday morning (June 27)
>  at 7:30am (Seattle time). If that sounds achievable for everyone,
>  please let me know and I'll see if I can find a room for us to use.
>
>  Cheers,
>  David.
>
>
>  On 16 May 2017 at 16:52, David Nickerson <dav...@gm...>
>  wrote:
>
>  I've been looking at the time zones, and if we look at holding a
>  SED-ML editors meeting at something like 7:30am one morning in
>  Seattle, that would be 4:30pm for Europe and 11:30am for Ion if he
>  doesn't make it. The alternative would be something at lunch time
>  (10pm Europe. 4pm UConn) or using one of the morning HARMONY sessions
>  directly (although that is probably the least optimal solution).
>
>  And then if we try to schedule any SED-ML session for the morning,
>  that would probably make the best chance of getting people from Europe
>  to join in.
>
>
>  Cheers,
>  Andre.
>
>
>  On 10 May 2017 at 23:18, Brett G. Olivier <b.g...@vu...> wrote:
>
>  Hi David
>
>  I won't be at HARMONY but I'm quite happy for there to be a meeting and
>  be
>  recycled etc.
>
>  Cheers
>  Brett
>
>
>
>  On 08-May-17 6:36 AM, David Nickerson wrote:
>
>
>  Hi all,
>
>  (CC'ing Dagmar as the SED-ML delegate on the COMBINE coordination
>  board)
>
>  It seems we've all been pretty inactive in the world of SED-ML lately
>  (and the community at large is relatively inactive). I know we should
>  have already had an election with Sven and Ion's terms completing at
>  the end of 2016, but we missed that one :)
>
>  Who will be at HARMONY this June in Seattle? I'll be there. Will there
>  be enough of us to have an editors meeting? or at least to cut down on
>  the time zones a meeting would need to cover? Could be a good
>  opportunity to summarise where the community is at and where we are
>  going and maybe get the cycling of SED-ML editors back in line with
>  the other COMBINE standards?
>
>  Or should we try and have an election prior to HARMONY? there is
>  probably just enough time if we get things underway soon...
>
>  Regardless, we should also be thinking about and proposing sessions
>  for HARMONY. Given the current state of things, my preference is for
>  some hacking sessions to see if we can get SED-ML implementation to
>  catch up to the L1V3 specification draft. And also on a refresh of the
>  website and code repositories.
>
>
>  Cheers,
>  David.
>
>
> ________________________________
>
>
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>
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>
>
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>
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>
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>
>
>  David Nickerson
>  about.me/david.nickerson
>
> ________________________________
>
>
>  Check out the vibrant tech community on one of the world's most
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Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

[Moraru,Ion <mo...@uc...>]

Unfortunately I will not be coming to Seattle but I can attend remotely.  Should I set up a Zoom link for 7:30 to 9:30?
Cheers, Ion

From: Dagmar Waltemath [mailto:dag...@un...]
Sent: Tuesday, May 23, 2017 12:10 AM
To: David Nickerson <dav...@gm...>; sed...@li...
Subject: Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

7:30am! That is the real editor spirit :)

Many greets,
Dagmar


Am 23. Mai 2017 00:48:18 MESZ schrieb David Nickerson <dav...@gm...<mailto:dav...@gm...>>:

Hi all,

Kyle has booked us a room in the Bioengineering building on the
Wednesday morning at 7:30 and has offered to be there to let us into
the building :)

Cheers,
David.


On 21 May 2017 at 08:50, David Nickerson <dav...@gm...<mailto:dav...@gm...>> wrote:

 Thanks Lucian.

 Wednesday morning is ok for me for the editors meeting, but probably
 no later. I'm keen to discuss some of the issues around spec writing,
 where the spec is hosted, etc. and would be good for the editors to
 get a plan ready and presented at HARMONY for some discussion. I'll
 see if Kyle can find us a room at UW for the meeting.

 I'll send out the nomination form soon.

 Cheers,
 David.


 On 20 May 2017 at 03:32, Lucian Smith <luc...@gm...<mailto:luc...@gm...>> wrote:

 Thanks for getting the nominations started!  I added a non-required question
 to the form for 'why do you think this person would make a good
 editor'--we've been compiling those answers and including them on the voting
 form for SBML editors in the past.

 Tuesday morning is the same time as the SBML SAB meeting, which I'll be at,
 but 7:30 in the morning in general is a good time to have a meeting.  Maybe
 Wednesday?

 -Lucian

 On Thu, May 18, 2017 at 8:45 PM, David Nickerson <dav...@gm...<mailto:dav...@gm...>>
 wrote:

 Hi all,

 Following up on Lucian's comment that it would be useful to hold the
 editor election prior to HARMONY so that we can get the new editors
 quickly on board, I have just set up the nomination form to start the
 process. If there are no objections, I propose sending this out in the
 next day or two and then allowing 2 weeks (until June 4) for people to
 submit nominations. That would give us a few days to contact the
 nominees followed by the two week voting period and be all done before
 HARMONY starts. Just :)

 Does that sound like a good plan? I'll wait until at least one or two
 other editors favourably reply before actually instigating anything.

 For the editors meeting at HARMONY, I propose trying to assemble the
 current editors and any past editors who can make it (I know Frank
 will be in Seattle). If there are no preferences otherwise and since
 there is currently no SED-ML scheduled for the Monday of HARMONY, I'd
 like to propose holding the editors meeting Tuesday morning (June 27)
 at 7:30am (Seattle time). If that sounds achievable for everyone,
 please let me know and I'll see if I can find a room for us to use.

 Cheers,
 David.


 On 16 May 2017 at 16:52, David Nickerson <dav...@gm...<mailto:dav...@gm...>>
 wrote:

 I've been looking at the time zones, and if we look at holding a
 SED-ML editors meeting at something like 7:30am one morning in
 Seattle, that would be 4:30pm for Europe and 11:30am for Ion if he
 doesn't make it. The alternative would be something at lunch time
 (10pm Europe. 4pm UConn) or using one of the morning HARMONY sessions
 directly (although that is probably the least optimal solution).

 And then if we try to schedule any SED-ML session for the morning,
 that would probably make the best chance of getting people from Europe
 to join in.


 Cheers,
 Andre.


 On 10 May 2017 at 23:18, Brett G. Olivier <b.g...@vu...<mailto:b.g...@vu...>> wrote:

 Hi David

 I won't be at HARMONY but I'm quite happy for there to be a meeting and
 be
 recycled etc.

 Cheers
 Brett



 On 08-May-17 6:36 AM, David Nickerson wrote:

 Hi all,

 (CC'ing Dagmar as the SED-ML delegate on the COMBINE coordination
 board)

 It seems we've all been pretty inactive in the world of SED-ML lately
 (and the community at large is relatively inactive). I know we should
 have already had an election with Sven and Ion's terms completing at
 the end of 2016, but we missed that one :)

 Who will be at HARMONY this June in Seattle? I'll be there. Will there
 be enough of us to have an editors meeting? or at least to cut down on
 the time zones a meeting would need to cover? Could be a good
 opportunity to summarise where the community is at and where we are
 going and maybe get the cycling of SED-ML editors back in line with
 the other COMBINE standards?

 Or should we try and have an election prior to HARMONY? there is
 probably just enough time if we get things underway soon...

 Regardless, we should also be thinking about and proposing sessions
 for HARMONY. Given the current state of things, my preference is for
 some hacking sessions to see if we can get SED-ML implementation to
 catch up to the L1V3 specification draft. And also on a refresh of the
 website and code repositories.


 Cheers,
 David.



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Re: [sed-ml-editors] Election form

[David N. <dav...@gm...>]

Thanks Brett.

We're already up to 10 votes, so thats a good sign for the community :)

On 9 June 2017 at 19:24, Brett G. Olivier <b.g...@vu...> wrote:
> Hi David
>
> Looks fine to me.
>
> Thanks
> b.
>
>
> On 09/06/2017 01:19, David Nickerson wrote:
>>
>> Hi all,
>>
>>  From the five unique nominees, four have accepted their nomination. I
>> have just shared the election form with you - please take a look and
>> either make changes directly or let me know. I'm keen to get this out
>> as soon as possible to get the election over before HARMONY - but I'll
>> wait for at least one other to look it over :)
>>
>> Only one person put a comment supporting their nominee, so I have left
>> that out...but it could be added in if others think it should be
>> there.
>>
>>
>> Direct link to form:
>>
>> https://docs.google.com/forms/d/191TTGCJaM0A38g-McvWsoxWFKNvPwAwcEObbwNQTCE4/edit?usp=sharing
>>
>>
>> Cheers,
>> David.
>>
>>
>
> --
> Brett G. Olivier PhD
> Systems Bioinformatics
> Vrije Universiteit Amsterdam
> Tel: +31 20 5987248
>
>
>
> ------------------------------------------------------------------------------
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Re: [sed-ml-editors] Election form

[Brett G. O. <b.g...@vu...>]

Hi David

Looks fine to me.

Thanks
b.


On 09/06/2017 01:19, David Nickerson wrote:
> Hi all,
>
>  From the five unique nominees, four have accepted their nomination. I
> have just shared the election form with you - please take a look and
> either make changes directly or let me know. I'm keen to get this out
> as soon as possible to get the election over before HARMONY - but I'll
> wait for at least one other to look it over :)
>
> Only one person put a comment supporting their nominee, so I have left
> that out...but it could be added in if others think it should be
> there.
>
>
> Direct link to form:
> https://docs.google.com/forms/d/191TTGCJaM0A38g-McvWsoxWFKNvPwAwcEObbwNQTCE4/edit?usp=sharing
>
>
> Cheers,
> David.
>
>

-- 
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Systems Bioinformatics
Vrije Universiteit Amsterdam
Tel: +31 20 5987248

Re: [sed-ml-editors] Election form

[David N. <dav...@gm...>]

Thanks Lucian. I just realised that the form would only allow one
editor to be selected, so I have now changed it to allow voters to
select "at most 2" candidates and updated the text to match.

Cheers,
David.

On 9 June 2017 at 11:24, Lucian Smith <luc...@gm...> wrote:
> Looks good to me!  Thanks again, David.
>
> -Lucian
>
> On Thu, Jun 8, 2017 at 4:19 PM, David Nickerson <dav...@gm...>
> wrote:
>>
>> Hi all,
>>
>> From the five unique nominees, four have accepted their nomination. I
>> have just shared the election form with you - please take a look and
>> either make changes directly or let me know. I'm keen to get this out
>> as soon as possible to get the election over before HARMONY - but I'll
>> wait for at least one other to look it over :)
>>
>> Only one person put a comment supporting their nominee, so I have left
>> that out...but it could be added in if others think it should be
>> there.
>>
>>
>> Direct link to form:
>>
>> https://docs.google.com/forms/d/191TTGCJaM0A38g-McvWsoxWFKNvPwAwcEObbwNQTCE4/edit?usp=sharing
>>
>>
>> Cheers,
>> David.
>>
>>
>> --
>>
>>
>> David Nickerson
>> about.me/david.nickerson
>>
>>
>> ------------------------------------------------------------------------------
>> Check out the vibrant tech community on one of the world's most
>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>> _______________________________________________
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>
>



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Re: [sed-ml-editors] Election form

[Lucian S. <luc...@gm...>]

Looks good to me!  Thanks again, David.

-Lucian

On Thu, Jun 8, 2017 at 4:19 PM, David Nickerson <dav...@gm...>
wrote:

> Hi all,
>
> From the five unique nominees, four have accepted their nomination. I
> have just shared the election form with you - please take a look and
> either make changes directly or let me know. I'm keen to get this out
> as soon as possible to get the election over before HARMONY - but I'll
> wait for at least one other to look it over :)
>
> Only one person put a comment supporting their nominee, so I have left
> that out...but it could be added in if others think it should be
> there.
>
>
> Direct link to form:
> https://docs.google.com/forms/d/191TTGCJaM0A38g-
> McvWsoxWFKNvPwAwcEObbwNQTCE4/edit?usp=sharing
>
>
> Cheers,
> David.
>
>
> --
>
>
> David Nickerson
> about.me/david.nickerson
>
> ------------------------------------------------------------
> ------------------
> Check out the vibrant tech community on one of the world's most
> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
> _______________________________________________
> sed-ml-editors mailing list
> sed...@li...
> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors
>

[sed-ml-editors] Election form

[David N. <dav...@gm...>]

Hi all,

>From the five unique nominees, four have accepted their nomination. I
have just shared the election form with you - please take a look and
either make changes directly or let me know. I'm keen to get this out
as soon as possible to get the election over before HARMONY - but I'll
wait for at least one other to look it over :)

Only one person put a comment supporting their nominee, so I have left
that out...but it could be added in if others think it should be
there.


Direct link to form:
https://docs.google.com/forms/d/191TTGCJaM0A38g-McvWsoxWFKNvPwAwcEObbwNQTCE4/edit?usp=sharing


Cheers,
David.


-- 


David Nickerson
about.me/david.nickerson

[sed-ml-editors] Editor nominations

[David N. <dav...@gm...>]

Hi all,

Just to let you know that there were 7 nominations and 5 unique
candidates nominated. I'll contact them all now and see who accepts
their nomination.

Cheers,
David.

-- 


David Nickerson
about.me/david.nickerson

[sed-ml-editors] NMR Services from Creative Biostructure to Accelerate Your Success

[Creative B. <cus...@cr...>]

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Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

[Dagmar W. <dag...@un...>]

7:30am! That is the real editor spirit :) 

Many greets, 
Dagmar 



Am 23. Mai 2017 00:48:18 MESZ schrieb David Nickerson <dav...@gm...>:
>Hi all,
>
>Kyle has booked us a room in the Bioengineering building on the
>Wednesday morning at 7:30 and has offered to be there to let us into
>the building :)
>
>Cheers,
>David.
>
>
>On 21 May 2017 at 08:50, David Nickerson <dav...@gm...>
>wrote:
>> Thanks Lucian.
>>
>> Wednesday morning is ok for me for the editors meeting, but probably
>> no later. I'm keen to discuss some of the issues around spec writing,
>> where the spec is hosted, etc. and would be good for the editors to
>> get a plan ready and presented at HARMONY for some discussion. I'll
>> see if Kyle can find us a room at UW for the meeting.
>>
>> I'll send out the nomination form soon.
>>
>> Cheers,
>> David.
>>
>>
>> On 20 May 2017 at 03:32, Lucian Smith <luc...@gm...>
>wrote:
>>> Thanks for getting the nominations started!  I added a non-required
>question
>>> to the form for 'why do you think this person would make a good
>>> editor'--we've been compiling those answers and including them on
>the voting
>>> form for SBML editors in the past.
>>>
>>> Tuesday morning is the same time as the SBML SAB meeting, which I'll
>be at,
>>> but 7:30 in the morning in general is a good time to have a meeting.
> Maybe
>>> Wednesday?
>>>
>>> -Lucian
>>>
>>> On Thu, May 18, 2017 at 8:45 PM, David Nickerson
><dav...@gm...>
>>> wrote:
>>>>
>>>> Hi all,
>>>>
>>>> Following up on Lucian's comment that it would be useful to hold
>the
>>>> editor election prior to HARMONY so that we can get the new editors
>>>> quickly on board, I have just set up the nomination form to start
>the
>>>> process. If there are no objections, I propose sending this out in
>the
>>>> next day or two and then allowing 2 weeks (until June 4) for people
>to
>>>> submit nominations. That would give us a few days to contact the
>>>> nominees followed by the two week voting period and be all done
>before
>>>> HARMONY starts. Just :)
>>>>
>>>> Does that sound like a good plan? I'll wait until at least one or
>two
>>>> other editors favourably reply before actually instigating
>anything.
>>>>
>>>> For the editors meeting at HARMONY, I propose trying to assemble
>the
>>>> current editors and any past editors who can make it (I know Frank
>>>> will be in Seattle). If there are no preferences otherwise and
>since
>>>> there is currently no SED-ML scheduled for the Monday of HARMONY,
>I'd
>>>> like to propose holding the editors meeting Tuesday morning (June
>27)
>>>> at 7:30am (Seattle time). If that sounds achievable for everyone,
>>>> please let me know and I'll see if I can find a room for us to use.
>>>>
>>>> Cheers,
>>>> David.
>>>>
>>>>
>>>> On 16 May 2017 at 16:52, David Nickerson
><dav...@gm...>
>>>> wrote:
>>>> > I've been looking at the time zones, and if we look at holding a
>>>> > SED-ML editors meeting at something like 7:30am one morning in
>>>> > Seattle, that would be 4:30pm for Europe and 11:30am for Ion if
>he
>>>> > doesn't make it. The alternative would be something at lunch time
>>>> > (10pm Europe. 4pm UConn) or using one of the morning HARMONY
>sessions
>>>> > directly (although that is probably the least optimal solution).
>>>> >
>>>> > And then if we try to schedule any SED-ML session for the
>morning,
>>>> > that would probably make the best chance of getting people from
>Europe
>>>> > to join in.
>>>> >
>>>> >
>>>> > Cheers,
>>>> > Andre.
>>>> >
>>>> >
>>>> > On 10 May 2017 at 23:18, Brett G. Olivier <b.g...@vu...>
>wrote:
>>>> >> Hi David
>>>> >>
>>>> >> I won't be at HARMONY but I'm quite happy for there to be a
>meeting and
>>>> >> be
>>>> >> recycled etc.
>>>> >>
>>>> >> Cheers
>>>> >> Brett
>>>> >>
>>>> >>
>>>> >>
>>>> >> On 08-May-17 6:36 AM, David Nickerson wrote:
>>>> >>>
>>>> >>> Hi all,
>>>> >>>
>>>> >>> (CC'ing Dagmar as the SED-ML delegate on the COMBINE
>coordination
>>>> >>> board)
>>>> >>>
>>>> >>> It seems we've all been pretty inactive in the world of SED-ML
>lately
>>>> >>> (and the community at large is relatively inactive). I know we
>should
>>>> >>> have already had an election with Sven and Ion's terms
>completing at
>>>> >>> the end of 2016, but we missed that one :)
>>>> >>>
>>>> >>> Who will be at HARMONY this June in Seattle? I'll be there.
>Will there
>>>> >>> be enough of us to have an editors meeting? or at least to cut
>down on
>>>> >>> the time zones a meeting would need to cover? Could be a good
>>>> >>> opportunity to summarise where the community is at and where we
>are
>>>> >>> going and maybe get the cycling of SED-ML editors back in line
>with
>>>> >>> the other COMBINE standards?
>>>> >>>
>>>> >>> Or should we try and have an election prior to HARMONY? there
>is
>>>> >>> probably just enough time if we get things underway soon...
>>>> >>>
>>>> >>> Regardless, we should also be thinking about and proposing
>sessions
>>>> >>> for HARMONY. Given the current state of things, my preference
>is for
>>>> >>> some hacking sessions to see if we can get SED-ML
>implementation to
>>>> >>> catch up to the L1V3 specification draft. And also on a refresh
>of the
>>>> >>> website and code repositories.
>>>> >>>
>>>> >>>
>>>> >>> Cheers,
>>>> >>> David.
>>>> >>>
>>>> >>>
>>>> >>>
>>>> >>>
>------------------------------------------------------------------------------
>>>> >>> Check out the vibrant tech community on one of the world's most
>>>> >>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>>>> >>> _______________________________________________
>>>> >>> sed-ml-editors mailing list
>>>> >>> sed...@li...
>>>> >>> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors
>>>> >>
>>>> >>
>>>> >>
>>>> >> ---
>>>> >> This email has been checked for viruses by Avast antivirus
>software.
>>>> >> https://www.avast.com/antivirus
>>>> >>
>>>> >
>>>> >
>>>> >
>>>> > --
>>>> >
>>>> >
>>>> > David Nickerson
>>>> > about.me/david.nickerson
>>>>
>>>>
>>>>
>>>> --
>>>>
>>>>
>>>> David Nickerson
>>>> about.me/david.nickerson
>>>>
>>>>
>>>>
>------------------------------------------------------------------------------
>>>> Check out the vibrant tech community on one of the world's most
>>>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>>>> _______________________________________________
>>>> sed-ml-editors mailing list
>>>> sed...@li...
>>>> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors
>>>
>>>
>>
>>
>>
>> --
>>
>>
>> David Nickerson
>> about.me/david.nickerson
>
>
>
>-- 
>
>
>David Nickerson
>about.me/david.nickerson

-- 
Diese Nachricht wurde von meinem Android-Gerät mit K-9 Mail gesendet.

Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

[David N. <dav...@gm...>]

Hi all,

Kyle has booked us a room in the Bioengineering building on the
Wednesday morning at 7:30 and has offered to be there to let us into
the building :)

Cheers,
David.


On 21 May 2017 at 08:50, David Nickerson <dav...@gm...> wrote:
> Thanks Lucian.
>
> Wednesday morning is ok for me for the editors meeting, but probably
> no later. I'm keen to discuss some of the issues around spec writing,
> where the spec is hosted, etc. and would be good for the editors to
> get a plan ready and presented at HARMONY for some discussion. I'll
> see if Kyle can find us a room at UW for the meeting.
>
> I'll send out the nomination form soon.
>
> Cheers,
> David.
>
>
> On 20 May 2017 at 03:32, Lucian Smith <luc...@gm...> wrote:
>> Thanks for getting the nominations started!  I added a non-required question
>> to the form for 'why do you think this person would make a good
>> editor'--we've been compiling those answers and including them on the voting
>> form for SBML editors in the past.
>>
>> Tuesday morning is the same time as the SBML SAB meeting, which I'll be at,
>> but 7:30 in the morning in general is a good time to have a meeting.  Maybe
>> Wednesday?
>>
>> -Lucian
>>
>> On Thu, May 18, 2017 at 8:45 PM, David Nickerson <dav...@gm...>
>> wrote:
>>>
>>> Hi all,
>>>
>>> Following up on Lucian's comment that it would be useful to hold the
>>> editor election prior to HARMONY so that we can get the new editors
>>> quickly on board, I have just set up the nomination form to start the
>>> process. If there are no objections, I propose sending this out in the
>>> next day or two and then allowing 2 weeks (until June 4) for people to
>>> submit nominations. That would give us a few days to contact the
>>> nominees followed by the two week voting period and be all done before
>>> HARMONY starts. Just :)
>>>
>>> Does that sound like a good plan? I'll wait until at least one or two
>>> other editors favourably reply before actually instigating anything.
>>>
>>> For the editors meeting at HARMONY, I propose trying to assemble the
>>> current editors and any past editors who can make it (I know Frank
>>> will be in Seattle). If there are no preferences otherwise and since
>>> there is currently no SED-ML scheduled for the Monday of HARMONY, I'd
>>> like to propose holding the editors meeting Tuesday morning (June 27)
>>> at 7:30am (Seattle time). If that sounds achievable for everyone,
>>> please let me know and I'll see if I can find a room for us to use.
>>>
>>> Cheers,
>>> David.
>>>
>>>
>>> On 16 May 2017 at 16:52, David Nickerson <dav...@gm...>
>>> wrote:
>>> > I've been looking at the time zones, and if we look at holding a
>>> > SED-ML editors meeting at something like 7:30am one morning in
>>> > Seattle, that would be 4:30pm for Europe and 11:30am for Ion if he
>>> > doesn't make it. The alternative would be something at lunch time
>>> > (10pm Europe. 4pm UConn) or using one of the morning HARMONY sessions
>>> > directly (although that is probably the least optimal solution).
>>> >
>>> > And then if we try to schedule any SED-ML session for the morning,
>>> > that would probably make the best chance of getting people from Europe
>>> > to join in.
>>> >
>>> >
>>> > Cheers,
>>> > Andre.
>>> >
>>> >
>>> > On 10 May 2017 at 23:18, Brett G. Olivier <b.g...@vu...> wrote:
>>> >> Hi David
>>> >>
>>> >> I won't be at HARMONY but I'm quite happy for there to be a meeting and
>>> >> be
>>> >> recycled etc.
>>> >>
>>> >> Cheers
>>> >> Brett
>>> >>
>>> >>
>>> >>
>>> >> On 08-May-17 6:36 AM, David Nickerson wrote:
>>> >>>
>>> >>> Hi all,
>>> >>>
>>> >>> (CC'ing Dagmar as the SED-ML delegate on the COMBINE coordination
>>> >>> board)
>>> >>>
>>> >>> It seems we've all been pretty inactive in the world of SED-ML lately
>>> >>> (and the community at large is relatively inactive). I know we should
>>> >>> have already had an election with Sven and Ion's terms completing at
>>> >>> the end of 2016, but we missed that one :)
>>> >>>
>>> >>> Who will be at HARMONY this June in Seattle? I'll be there. Will there
>>> >>> be enough of us to have an editors meeting? or at least to cut down on
>>> >>> the time zones a meeting would need to cover? Could be a good
>>> >>> opportunity to summarise where the community is at and where we are
>>> >>> going and maybe get the cycling of SED-ML editors back in line with
>>> >>> the other COMBINE standards?
>>> >>>
>>> >>> Or should we try and have an election prior to HARMONY? there is
>>> >>> probably just enough time if we get things underway soon...
>>> >>>
>>> >>> Regardless, we should also be thinking about and proposing sessions
>>> >>> for HARMONY. Given the current state of things, my preference is for
>>> >>> some hacking sessions to see if we can get SED-ML implementation to
>>> >>> catch up to the L1V3 specification draft. And also on a refresh of the
>>> >>> website and code repositories.
>>> >>>
>>> >>>
>>> >>> Cheers,
>>> >>> David.
>>> >>>
>>> >>>
>>> >>>
>>> >>> ------------------------------------------------------------------------------
>>> >>> Check out the vibrant tech community on one of the world's most
>>> >>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>>> >>> _______________________________________________
>>> >>> sed-ml-editors mailing list
>>> >>> sed...@li...
>>> >>> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors
>>> >>
>>> >>
>>> >>
>>> >> ---
>>> >> This email has been checked for viruses by Avast antivirus software.
>>> >> https://www.avast.com/antivirus
>>> >>
>>> >
>>> >
>>> >
>>> > --
>>> >
>>> >
>>> > David Nickerson
>>> > about.me/david.nickerson
>>>
>>>
>>>
>>> --
>>>
>>>
>>> David Nickerson
>>> about.me/david.nickerson
>>>
>>>
>>> ------------------------------------------------------------------------------
>>> Check out the vibrant tech community on one of the world's most
>>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>>> _______________________________________________
>>> sed-ml-editors mailing list
>>> sed...@li...
>>> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors
>>
>>
>
>
>
> --
>
>
> David Nickerson
> about.me/david.nickerson



-- 


David Nickerson
about.me/david.nickerson

Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

[David N. <dav...@gm...>]

Thanks Lucian.

Wednesday morning is ok for me for the editors meeting, but probably
no later. I'm keen to discuss some of the issues around spec writing,
where the spec is hosted, etc. and would be good for the editors to
get a plan ready and presented at HARMONY for some discussion. I'll
see if Kyle can find us a room at UW for the meeting.

I'll send out the nomination form soon.

Cheers,
David.


On 20 May 2017 at 03:32, Lucian Smith <luc...@gm...> wrote:
> Thanks for getting the nominations started!  I added a non-required question
> to the form for 'why do you think this person would make a good
> editor'--we've been compiling those answers and including them on the voting
> form for SBML editors in the past.
>
> Tuesday morning is the same time as the SBML SAB meeting, which I'll be at,
> but 7:30 in the morning in general is a good time to have a meeting.  Maybe
> Wednesday?
>
> -Lucian
>
> On Thu, May 18, 2017 at 8:45 PM, David Nickerson <dav...@gm...>
> wrote:
>>
>> Hi all,
>>
>> Following up on Lucian's comment that it would be useful to hold the
>> editor election prior to HARMONY so that we can get the new editors
>> quickly on board, I have just set up the nomination form to start the
>> process. If there are no objections, I propose sending this out in the
>> next day or two and then allowing 2 weeks (until June 4) for people to
>> submit nominations. That would give us a few days to contact the
>> nominees followed by the two week voting period and be all done before
>> HARMONY starts. Just :)
>>
>> Does that sound like a good plan? I'll wait until at least one or two
>> other editors favourably reply before actually instigating anything.
>>
>> For the editors meeting at HARMONY, I propose trying to assemble the
>> current editors and any past editors who can make it (I know Frank
>> will be in Seattle). If there are no preferences otherwise and since
>> there is currently no SED-ML scheduled for the Monday of HARMONY, I'd
>> like to propose holding the editors meeting Tuesday morning (June 27)
>> at 7:30am (Seattle time). If that sounds achievable for everyone,
>> please let me know and I'll see if I can find a room for us to use.
>>
>> Cheers,
>> David.
>>
>>
>> On 16 May 2017 at 16:52, David Nickerson <dav...@gm...>
>> wrote:
>> > I've been looking at the time zones, and if we look at holding a
>> > SED-ML editors meeting at something like 7:30am one morning in
>> > Seattle, that would be 4:30pm for Europe and 11:30am for Ion if he
>> > doesn't make it. The alternative would be something at lunch time
>> > (10pm Europe. 4pm UConn) or using one of the morning HARMONY sessions
>> > directly (although that is probably the least optimal solution).
>> >
>> > And then if we try to schedule any SED-ML session for the morning,
>> > that would probably make the best chance of getting people from Europe
>> > to join in.
>> >
>> >
>> > Cheers,
>> > Andre.
>> >
>> >
>> > On 10 May 2017 at 23:18, Brett G. Olivier <b.g...@vu...> wrote:
>> >> Hi David
>> >>
>> >> I won't be at HARMONY but I'm quite happy for there to be a meeting and
>> >> be
>> >> recycled etc.
>> >>
>> >> Cheers
>> >> Brett
>> >>
>> >>
>> >>
>> >> On 08-May-17 6:36 AM, David Nickerson wrote:
>> >>>
>> >>> Hi all,
>> >>>
>> >>> (CC'ing Dagmar as the SED-ML delegate on the COMBINE coordination
>> >>> board)
>> >>>
>> >>> It seems we've all been pretty inactive in the world of SED-ML lately
>> >>> (and the community at large is relatively inactive). I know we should
>> >>> have already had an election with Sven and Ion's terms completing at
>> >>> the end of 2016, but we missed that one :)
>> >>>
>> >>> Who will be at HARMONY this June in Seattle? I'll be there. Will there
>> >>> be enough of us to have an editors meeting? or at least to cut down on
>> >>> the time zones a meeting would need to cover? Could be a good
>> >>> opportunity to summarise where the community is at and where we are
>> >>> going and maybe get the cycling of SED-ML editors back in line with
>> >>> the other COMBINE standards?
>> >>>
>> >>> Or should we try and have an election prior to HARMONY? there is
>> >>> probably just enough time if we get things underway soon...
>> >>>
>> >>> Regardless, we should also be thinking about and proposing sessions
>> >>> for HARMONY. Given the current state of things, my preference is for
>> >>> some hacking sessions to see if we can get SED-ML implementation to
>> >>> catch up to the L1V3 specification draft. And also on a refresh of the
>> >>> website and code repositories.
>> >>>
>> >>>
>> >>> Cheers,
>> >>> David.
>> >>>
>> >>>
>> >>>
>> >>> ------------------------------------------------------------------------------
>> >>> Check out the vibrant tech community on one of the world's most
>> >>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>> >>> _______________________________________________
>> >>> sed-ml-editors mailing list
>> >>> sed...@li...
>> >>> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors
>> >>
>> >>
>> >>
>> >> ---
>> >> This email has been checked for viruses by Avast antivirus software.
>> >> https://www.avast.com/antivirus
>> >>
>> >
>> >
>> >
>> > --
>> >
>> >
>> > David Nickerson
>> > about.me/david.nickerson
>>
>>
>>
>> --
>>
>>
>> David Nickerson
>> about.me/david.nickerson
>>
>>
>> ------------------------------------------------------------------------------
>> Check out the vibrant tech community on one of the world's most
>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>> _______________________________________________
>> sed-ml-editors mailing list
>> sed...@li...
>> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors
>
>



-- 


David Nickerson
about.me/david.nickerson

Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

[Dagmar W. <dag...@un...>]

Dear all,

thank you for keeping me cc:ed :) 

I am planning to join the SED-ML session remotely, the times that David was proposing all look good to me. 

Greets,
Dagmar

________________________________________
Von: David Nickerson [dav...@gm...]
Gesendet: Dienstag, 16. Mai 2017 06:52
An: Brett G. Olivier
Cc: sed...@li...; Dagmar Waltemath
Betreff: Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

I've been looking at the time zones, and if we look at holding a
SED-ML editors meeting at something like 7:30am one morning in
Seattle, that would be 4:30pm for Europe and 11:30am for Ion if he
doesn't make it. The alternative would be something at lunch time
(10pm Europe. 4pm UConn) or using one of the morning HARMONY sessions
directly (although that is probably the least optimal solution).

And then if we try to schedule any SED-ML session for the morning,
that would probably make the best chance of getting people from Europe
to join in.


Cheers,
Andre.


On 10 May 2017 at 23:18, Brett G. Olivier <b.g...@vu...> wrote:
> Hi David
>
> I won't be at HARMONY but I'm quite happy for there to be a meeting and be
> recycled etc.
>
> Cheers
> Brett
>
>
>
> On 08-May-17 6:36 AM, David Nickerson wrote:
>>
>> Hi all,
>>
>> (CC'ing Dagmar as the SED-ML delegate on the COMBINE coordination board)
>>
>> It seems we've all been pretty inactive in the world of SED-ML lately
>> (and the community at large is relatively inactive). I know we should
>> have already had an election with Sven and Ion's terms completing at
>> the end of 2016, but we missed that one :)
>>
>> Who will be at HARMONY this June in Seattle? I'll be there. Will there
>> be enough of us to have an editors meeting? or at least to cut down on
>> the time zones a meeting would need to cover? Could be a good
>> opportunity to summarise where the community is at and where we are
>> going and maybe get the cycling of SED-ML editors back in line with
>> the other COMBINE standards?
>>
>> Or should we try and have an election prior to HARMONY? there is
>> probably just enough time if we get things underway soon...
>>
>> Regardless, we should also be thinking about and proposing sessions
>> for HARMONY. Given the current state of things, my preference is for
>> some hacking sessions to see if we can get SED-ML implementation to
>> catch up to the L1V3 specification draft. And also on a refresh of the
>> website and code repositories.
>>
>>
>> Cheers,
>> David.
>>
>>
>> ------------------------------------------------------------------------------
>> Check out the vibrant tech community on one of the world's most
>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>> _______________________________________________
>> sed-ml-editors mailing list
>> sed...@li...
>> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors
>
>
>
> ---
> This email has been checked for viruses by Avast antivirus software.
> https://www.avast.com/antivirus
>



--


David Nickerson
about.me/david.nickerson

Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

[Lucian S. <luc...@gm...>]

Thanks for getting the nominations started!  I added a non-required
question to the form for 'why do you think this person would make a good
editor'--we've been compiling those answers and including them on the
voting form for SBML editors in the past.

Tuesday morning is the same time as the SBML SAB meeting, which I'll be at,
but 7:30 in the morning in general is a good time to have a meeting.  Maybe
Wednesday?

-Lucian

On Thu, May 18, 2017 at 8:45 PM, David Nickerson <dav...@gm...>
wrote:

> Hi all,
>
> Following up on Lucian's comment that it would be useful to hold the
> editor election prior to HARMONY so that we can get the new editors
> quickly on board, I have just set up the nomination form to start the
> process. If there are no objections, I propose sending this out in the
> next day or two and then allowing 2 weeks (until June 4) for people to
> submit nominations. That would give us a few days to contact the
> nominees followed by the two week voting period and be all done before
> HARMONY starts. Just :)
>
> Does that sound like a good plan? I'll wait until at least one or two
> other editors favourably reply before actually instigating anything.
>
> For the editors meeting at HARMONY, I propose trying to assemble the
> current editors and any past editors who can make it (I know Frank
> will be in Seattle). If there are no preferences otherwise and since
> there is currently no SED-ML scheduled for the Monday of HARMONY, I'd
> like to propose holding the editors meeting Tuesday morning (June 27)
> at 7:30am (Seattle time). If that sounds achievable for everyone,
> please let me know and I'll see if I can find a room for us to use.
>
> Cheers,
> David.
>
>
> On 16 May 2017 at 16:52, David Nickerson <dav...@gm...>
> wrote:
> > I've been looking at the time zones, and if we look at holding a
> > SED-ML editors meeting at something like 7:30am one morning in
> > Seattle, that would be 4:30pm for Europe and 11:30am for Ion if he
> > doesn't make it. The alternative would be something at lunch time
> > (10pm Europe. 4pm UConn) or using one of the morning HARMONY sessions
> > directly (although that is probably the least optimal solution).
> >
> > And then if we try to schedule any SED-ML session for the morning,
> > that would probably make the best chance of getting people from Europe
> > to join in.
> >
> >
> > Cheers,
> > Andre.
> >
> >
> > On 10 May 2017 at 23:18, Brett G. Olivier <b.g...@vu...> wrote:
> >> Hi David
> >>
> >> I won't be at HARMONY but I'm quite happy for there to be a meeting and
> be
> >> recycled etc.
> >>
> >> Cheers
> >> Brett
> >>
> >>
> >>
> >> On 08-May-17 6:36 AM, David Nickerson wrote:
> >>>
> >>> Hi all,
> >>>
> >>> (CC'ing Dagmar as the SED-ML delegate on the COMBINE coordination
> board)
> >>>
> >>> It seems we've all been pretty inactive in the world of SED-ML lately
> >>> (and the community at large is relatively inactive). I know we should
> >>> have already had an election with Sven and Ion's terms completing at
> >>> the end of 2016, but we missed that one :)
> >>>
> >>> Who will be at HARMONY this June in Seattle? I'll be there. Will there
> >>> be enough of us to have an editors meeting? or at least to cut down on
> >>> the time zones a meeting would need to cover? Could be a good
> >>> opportunity to summarise where the community is at and where we are
> >>> going and maybe get the cycling of SED-ML editors back in line with
> >>> the other COMBINE standards?
> >>>
> >>> Or should we try and have an election prior to HARMONY? there is
> >>> probably just enough time if we get things underway soon...
> >>>
> >>> Regardless, we should also be thinking about and proposing sessions
> >>> for HARMONY. Given the current state of things, my preference is for
> >>> some hacking sessions to see if we can get SED-ML implementation to
> >>> catch up to the L1V3 specification draft. And also on a refresh of the
> >>> website and code repositories.
> >>>
> >>>
> >>> Cheers,
> >>> David.
> >>>
> >>>
> >>> ------------------------------------------------------------
> ------------------
> >>> Check out the vibrant tech community on one of the world's most
> >>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
> >>> _______________________________________________
> >>> sed-ml-editors mailing list
> >>> sed...@li...
> >>> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors
> >>
> >>
> >>
> >> ---
> >> This email has been checked for viruses by Avast antivirus software.
> >> https://www.avast.com/antivirus
> >>
> >
> >
> >
> > --
> >
> >
> > David Nickerson
> > about.me/david.nickerson
>
>
>
> --
>
>
> David Nickerson
> about.me/david.nickerson
>
> ------------------------------------------------------------
> ------------------
> Check out the vibrant tech community on one of the world's most
> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
> _______________________________________________
> sed-ml-editors mailing list
> sed...@li...
> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors
>

Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

[Brett G. O. <b.g...@vu...>]

Hi David

Sounds like a good plan to me.

Best regards
Brett


On 19/05/2017 05:45, David Nickerson wrote:
> Hi all,
>
> Following up on Lucian's comment that it would be useful to hold the
> editor election prior to HARMONY so that we can get the new editors
> quickly on board, I have just set up the nomination form to start the
> process. If there are no objections, I propose sending this out in the
> next day or two and then allowing 2 weeks (until June 4) for people to
> submit nominations. That would give us a few days to contact the
> nominees followed by the two week voting period and be all done before
> HARMONY starts. Just :)
>
> Does that sound like a good plan? I'll wait until at least one or two
> other editors favourably reply before actually instigating anything.
>
> For the editors meeting at HARMONY, I propose trying to assemble the
> current editors and any past editors who can make it (I know Frank
> will be in Seattle). If there are no preferences otherwise and since
> there is currently no SED-ML scheduled for the Monday of HARMONY, I'd
> like to propose holding the editors meeting Tuesday morning (June 27)
> at 7:30am (Seattle time). If that sounds achievable for everyone,
> please let me know and I'll see if I can find a room for us to use.
>
> Cheers,
> David.
>
>
> On 16 May 2017 at 16:52, David Nickerson <dav...@gm...> wrote:
>> I've been looking at the time zones, and if we look at holding a
>> SED-ML editors meeting at something like 7:30am one morning in
>> Seattle, that would be 4:30pm for Europe and 11:30am for Ion if he
>> doesn't make it. The alternative would be something at lunch time
>> (10pm Europe. 4pm UConn) or using one of the morning HARMONY sessions
>> directly (although that is probably the least optimal solution).
>>
>> And then if we try to schedule any SED-ML session for the morning,
>> that would probably make the best chance of getting people from Europe
>> to join in.
>>
>>
>> Cheers,
>> Andre.
>>
>>
>> On 10 May 2017 at 23:18, Brett G. Olivier <b.g...@vu...> wrote:
>>> Hi David
>>>
>>> I won't be at HARMONY but I'm quite happy for there to be a meeting and be
>>> recycled etc.
>>>
>>> Cheers
>>> Brett
>>>
>>>
>>>
>>> On 08-May-17 6:36 AM, David Nickerson wrote:
>>>> Hi all,
>>>>
>>>> (CC'ing Dagmar as the SED-ML delegate on the COMBINE coordination board)
>>>>
>>>> It seems we've all been pretty inactive in the world of SED-ML lately
>>>> (and the community at large is relatively inactive). I know we should
>>>> have already had an election with Sven and Ion's terms completing at
>>>> the end of 2016, but we missed that one :)
>>>>
>>>> Who will be at HARMONY this June in Seattle? I'll be there. Will there
>>>> be enough of us to have an editors meeting? or at least to cut down on
>>>> the time zones a meeting would need to cover? Could be a good
>>>> opportunity to summarise where the community is at and where we are
>>>> going and maybe get the cycling of SED-ML editors back in line with
>>>> the other COMBINE standards?
>>>>
>>>> Or should we try and have an election prior to HARMONY? there is
>>>> probably just enough time if we get things underway soon...
>>>>
>>>> Regardless, we should also be thinking about and proposing sessions
>>>> for HARMONY. Given the current state of things, my preference is for
>>>> some hacking sessions to see if we can get SED-ML implementation to
>>>> catch up to the L1V3 specification draft. And also on a refresh of the
>>>> website and code repositories.
>>>>
>>>>
>>>> Cheers,
>>>> David.
>>>>
>>>>
>>>> ------------------------------------------------------------------------------
>>>> Check out the vibrant tech community on one of the world's most
>>>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>>>> _______________________________________________
>>>> sed-ml-editors mailing list
>>>> sed...@li...
>>>> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors
>>>
>>>
>>> ---
>>> This email has been checked for viruses by Avast antivirus software.
>>> https://www.avast.com/antivirus
>>>
>>
>>
>> --
>>
>>
>> David Nickerson
>> about.me/david.nickerson
>
>

-- 
Brett G. Olivier PhD
Systems Bioinformatics
Vrije Universiteit Amsterdam
Tel: +31 20 5987248

Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

[David N. <dav...@gm...>]

Hi all,

Following up on Lucian's comment that it would be useful to hold the
editor election prior to HARMONY so that we can get the new editors
quickly on board, I have just set up the nomination form to start the
process. If there are no objections, I propose sending this out in the
next day or two and then allowing 2 weeks (until June 4) for people to
submit nominations. That would give us a few days to contact the
nominees followed by the two week voting period and be all done before
HARMONY starts. Just :)

Does that sound like a good plan? I'll wait until at least one or two
other editors favourably reply before actually instigating anything.

For the editors meeting at HARMONY, I propose trying to assemble the
current editors and any past editors who can make it (I know Frank
will be in Seattle). If there are no preferences otherwise and since
there is currently no SED-ML scheduled for the Monday of HARMONY, I'd
like to propose holding the editors meeting Tuesday morning (June 27)
at 7:30am (Seattle time). If that sounds achievable for everyone,
please let me know and I'll see if I can find a room for us to use.

Cheers,
David.


On 16 May 2017 at 16:52, David Nickerson <dav...@gm...> wrote:
> I've been looking at the time zones, and if we look at holding a
> SED-ML editors meeting at something like 7:30am one morning in
> Seattle, that would be 4:30pm for Europe and 11:30am for Ion if he
> doesn't make it. The alternative would be something at lunch time
> (10pm Europe. 4pm UConn) or using one of the morning HARMONY sessions
> directly (although that is probably the least optimal solution).
>
> And then if we try to schedule any SED-ML session for the morning,
> that would probably make the best chance of getting people from Europe
> to join in.
>
>
> Cheers,
> Andre.
>
>
> On 10 May 2017 at 23:18, Brett G. Olivier <b.g...@vu...> wrote:
>> Hi David
>>
>> I won't be at HARMONY but I'm quite happy for there to be a meeting and be
>> recycled etc.
>>
>> Cheers
>> Brett
>>
>>
>>
>> On 08-May-17 6:36 AM, David Nickerson wrote:
>>>
>>> Hi all,
>>>
>>> (CC'ing Dagmar as the SED-ML delegate on the COMBINE coordination board)
>>>
>>> It seems we've all been pretty inactive in the world of SED-ML lately
>>> (and the community at large is relatively inactive). I know we should
>>> have already had an election with Sven and Ion's terms completing at
>>> the end of 2016, but we missed that one :)
>>>
>>> Who will be at HARMONY this June in Seattle? I'll be there. Will there
>>> be enough of us to have an editors meeting? or at least to cut down on
>>> the time zones a meeting would need to cover? Could be a good
>>> opportunity to summarise where the community is at and where we are
>>> going and maybe get the cycling of SED-ML editors back in line with
>>> the other COMBINE standards?
>>>
>>> Or should we try and have an election prior to HARMONY? there is
>>> probably just enough time if we get things underway soon...
>>>
>>> Regardless, we should also be thinking about and proposing sessions
>>> for HARMONY. Given the current state of things, my preference is for
>>> some hacking sessions to see if we can get SED-ML implementation to
>>> catch up to the L1V3 specification draft. And also on a refresh of the
>>> website and code repositories.
>>>
>>>
>>> Cheers,
>>> David.
>>>
>>>
>>> ------------------------------------------------------------------------------
>>> Check out the vibrant tech community on one of the world's most
>>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>>> _______________________________________________
>>> sed-ml-editors mailing list
>>> sed...@li...
>>> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors
>>
>>
>>
>> ---
>> This email has been checked for viruses by Avast antivirus software.
>> https://www.avast.com/antivirus
>>
>
>
>
> --
>
>
> David Nickerson
> about.me/david.nickerson



-- 


David Nickerson
about.me/david.nickerson

[sed-ml-editors] Find A Partner to Solve Membrane Protein or Structure Problem?

[Creative B. <cus...@cr...>]

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Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

[David N. <dav...@gm...>]

I've been looking at the time zones, and if we look at holding a
SED-ML editors meeting at something like 7:30am one morning in
Seattle, that would be 4:30pm for Europe and 11:30am for Ion if he
doesn't make it. The alternative would be something at lunch time
(10pm Europe. 4pm UConn) or using one of the morning HARMONY sessions
directly (although that is probably the least optimal solution).

And then if we try to schedule any SED-ML session for the morning,
that would probably make the best chance of getting people from Europe
to join in.


Cheers,
Andre.


On 10 May 2017 at 23:18, Brett G. Olivier <b.g...@vu...> wrote:
> Hi David
>
> I won't be at HARMONY but I'm quite happy for there to be a meeting and be
> recycled etc.
>
> Cheers
> Brett
>
>
>
> On 08-May-17 6:36 AM, David Nickerson wrote:
>>
>> Hi all,
>>
>> (CC'ing Dagmar as the SED-ML delegate on the COMBINE coordination board)
>>
>> It seems we've all been pretty inactive in the world of SED-ML lately
>> (and the community at large is relatively inactive). I know we should
>> have already had an election with Sven and Ion's terms completing at
>> the end of 2016, but we missed that one :)
>>
>> Who will be at HARMONY this June in Seattle? I'll be there. Will there
>> be enough of us to have an editors meeting? or at least to cut down on
>> the time zones a meeting would need to cover? Could be a good
>> opportunity to summarise where the community is at and where we are
>> going and maybe get the cycling of SED-ML editors back in line with
>> the other COMBINE standards?
>>
>> Or should we try and have an election prior to HARMONY? there is
>> probably just enough time if we get things underway soon...
>>
>> Regardless, we should also be thinking about and proposing sessions
>> for HARMONY. Given the current state of things, my preference is for
>> some hacking sessions to see if we can get SED-ML implementation to
>> catch up to the L1V3 specification draft. And also on a refresh of the
>> website and code repositories.
>>
>>
>> Cheers,
>> David.
>>
>>
>> ------------------------------------------------------------------------------
>> Check out the vibrant tech community on one of the world's most
>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>> _______________________________________________
>> sed-ml-editors mailing list
>> sed...@li...
>> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors
>
>
>
> ---
> This email has been checked for viruses by Avast antivirus software.
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>



-- 


David Nickerson
about.me/david.nickerson

Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

[Brett G. O. <b.g...@vu...>]

Hi David

I won't be at HARMONY but I'm quite happy for there to be a meeting and 
be recycled etc.

Cheers
Brett


On 08-May-17 6:36 AM, David Nickerson wrote:
> Hi all,
>
> (CC'ing Dagmar as the SED-ML delegate on the COMBINE coordination board)
>
> It seems we've all been pretty inactive in the world of SED-ML lately
> (and the community at large is relatively inactive). I know we should
> have already had an election with Sven and Ion's terms completing at
> the end of 2016, but we missed that one :)
>
> Who will be at HARMONY this June in Seattle? I'll be there. Will there
> be enough of us to have an editors meeting? or at least to cut down on
> the time zones a meeting would need to cover? Could be a good
> opportunity to summarise where the community is at and where we are
> going and maybe get the cycling of SED-ML editors back in line with
> the other COMBINE standards?
>
> Or should we try and have an election prior to HARMONY? there is
> probably just enough time if we get things underway soon...
>
> Regardless, we should also be thinking about and proposing sessions
> for HARMONY. Given the current state of things, my preference is for
> some hacking sessions to see if we can get SED-ML implementation to
> catch up to the L1V3 specification draft. And also on a refresh of the
> website and code repositories.
>
>
> Cheers,
> David.
>
> ------------------------------------------------------------------------------
> Check out the vibrant tech community on one of the world's most
> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
> _______________________________________________
> sed-ml-editors mailing list
> sed...@li...
> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors


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Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

[Moraru,Ion <mo...@uc...>]

I am currently planning to attend in person, but can't fully confirm yet.
Ion

-----Original Message-----
From: David Nickerson [mailto:dav...@gm...] 
Sent: Monday, May 8, 2017 8:16 PM
To: Lucian Smith <luc...@gm...>
Cc: sed...@li...; Dagmar Waltemath <dag...@un...>
Subject: Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

just a quick reply to update Dagmar's email address....

On 9 May 2017 at 12:11, Lucian Smith <luc...@gm...> wrote:
> Thanks for getting us moving again, David!  I'll be there 
> (surprisingly enough), and would be happy to be in an editors meeting.
>
> I'm not sure what I think about voting in new editors.  I guess it'd 
> be nice to actually have our new editors in time for HARMONY, so they 
> could attend the meeting?
>
> -Lucian
>
> On Sun, May 7, 2017 at 9:36 PM, David Nickerson 
> <dav...@gm...>
> wrote:
>>
>> Hi all,
>>
>> (CC'ing Dagmar as the SED-ML delegate on the COMBINE coordination 
>> board)
>>
>> It seems we've all been pretty inactive in the world of SED-ML lately 
>> (and the community at large is relatively inactive). I know we should 
>> have already had an election with Sven and Ion's terms completing at 
>> the end of 2016, but we missed that one :)
>>
>> Who will be at HARMONY this June in Seattle? I'll be there. Will 
>> there be enough of us to have an editors meeting? or at least to cut 
>> down on the time zones a meeting would need to cover? Could be a good 
>> opportunity to summarise where the community is at and where we are 
>> going and maybe get the cycling of SED-ML editors back in line with 
>> the other COMBINE standards?
>>
>> Or should we try and have an election prior to HARMONY? there is 
>> probably just enough time if we get things underway soon...
>>
>> Regardless, we should also be thinking about and proposing sessions 
>> for HARMONY. Given the current state of things, my preference is for 
>> some hacking sessions to see if we can get SED-ML implementation to 
>> catch up to the L1V3 specification draft. And also on a refresh of 
>> the website and code repositories.
>>
>>
>> Cheers,
>> David.
>>
>>
>> ---------------------------------------------------------------------
>> --------- Check out the vibrant tech community on one of the world's 
>> most engaging tech sites, Slashdot.org! 
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__sdm.link_slashdot
>> &d=DwICAg&c=EZxp_D7cDnouwj5YEFHgXuSKoUq2zVQZ_7Fw9yfotck&r=Uahi_Qsm5Bu
>> afcKS0wC-iw&m=ZOqFso1uWEUCoXSVjWr0U_EmpUdq9CPe_cf2I-SzHOs&s=-HnVKYths
>> yOXQ-yBMeZ7N18diMRVWYrwsn8WQW9V6Eg&e=
>> _______________________________________________
>> sed-ml-editors mailing list
>> sed...@li...
>> https://urldefense.proofpoint.com/v2/url?u=https-3A__lists.sourceforg
>> e.net_lists_listinfo_sed-2Dml-2Deditors&d=DwICAg&c=EZxp_D7cDnouwj5YEF
>> HgXuSKoUq2zVQZ_7Fw9yfotck&r=Uahi_Qsm5BuafcKS0wC-iw&m=ZOqFso1uWEUCoXSV
>> jWr0U_EmpUdq9CPe_cf2I-SzHOs&s=nGIijtckQ3n72wcManDQkxakTO3B0YTSe56XN9o
>> kCW4&e=
>
>



-- 


David Nickerson
about.me/david.nickerson

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Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

[David N. <dav...@gm...>]

just a quick reply to update Dagmar's email address....

On 9 May 2017 at 12:11, Lucian Smith <luc...@gm...> wrote:
> Thanks for getting us moving again, David!  I'll be there (surprisingly
> enough), and would be happy to be in an editors meeting.
>
> I'm not sure what I think about voting in new editors.  I guess it'd be nice
> to actually have our new editors in time for HARMONY, so they could attend
> the meeting?
>
> -Lucian
>
> On Sun, May 7, 2017 at 9:36 PM, David Nickerson <dav...@gm...>
> wrote:
>>
>> Hi all,
>>
>> (CC'ing Dagmar as the SED-ML delegate on the COMBINE coordination board)
>>
>> It seems we've all been pretty inactive in the world of SED-ML lately
>> (and the community at large is relatively inactive). I know we should
>> have already had an election with Sven and Ion's terms completing at
>> the end of 2016, but we missed that one :)
>>
>> Who will be at HARMONY this June in Seattle? I'll be there. Will there
>> be enough of us to have an editors meeting? or at least to cut down on
>> the time zones a meeting would need to cover? Could be a good
>> opportunity to summarise where the community is at and where we are
>> going and maybe get the cycling of SED-ML editors back in line with
>> the other COMBINE standards?
>>
>> Or should we try and have an election prior to HARMONY? there is
>> probably just enough time if we get things underway soon...
>>
>> Regardless, we should also be thinking about and proposing sessions
>> for HARMONY. Given the current state of things, my preference is for
>> some hacking sessions to see if we can get SED-ML implementation to
>> catch up to the L1V3 specification draft. And also on a refresh of the
>> website and code repositories.
>>
>>
>> Cheers,
>> David.
>>
>>
>> ------------------------------------------------------------------------------
>> Check out the vibrant tech community on one of the world's most
>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>> _______________________________________________
>> sed-ml-editors mailing list
>> sed...@li...
>> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors
>
>



-- 


David Nickerson
about.me/david.nickerson

Re: [sed-ml-editors] SED-ML editorial board status and HARMONY planning

[Lucian S. <luc...@gm...>]

Thanks for getting us moving again, David!  I'll be there (surprisingly
enough), and would be happy to be in an editors meeting.

I'm not sure what I think about voting in new editors.  I guess it'd be
nice to actually have our new editors in time for HARMONY, so they could
attend the meeting?

-Lucian

On Sun, May 7, 2017 at 9:36 PM, David Nickerson <dav...@gm...>
wrote:

> Hi all,
>
> (CC'ing Dagmar as the SED-ML delegate on the COMBINE coordination board)
>
> It seems we've all been pretty inactive in the world of SED-ML lately
> (and the community at large is relatively inactive). I know we should
> have already had an election with Sven and Ion's terms completing at
> the end of 2016, but we missed that one :)
>
> Who will be at HARMONY this June in Seattle? I'll be there. Will there
> be enough of us to have an editors meeting? or at least to cut down on
> the time zones a meeting would need to cover? Could be a good
> opportunity to summarise where the community is at and where we are
> going and maybe get the cycling of SED-ML editors back in line with
> the other COMBINE standards?
>
> Or should we try and have an election prior to HARMONY? there is
> probably just enough time if we get things underway soon...
>
> Regardless, we should also be thinking about and proposing sessions
> for HARMONY. Given the current state of things, my preference is for
> some hacking sessions to see if we can get SED-ML implementation to
> catch up to the L1V3 specification draft. And also on a refresh of the
> website and code repositories.
>
>
> Cheers,
> David.
>
> ------------------------------------------------------------
> ------------------
> Check out the vibrant tech community on one of the world's most
> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
> _______________________________________________
> sed-ml-editors mailing list
> sed...@li...
> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors
>

[sed-ml-editors] SED-ML editorial board status and HARMONY planning

[David N. <dav...@gm...>]

Hi all,

(CC'ing Dagmar as the SED-ML delegate on the COMBINE coordination board)

It seems we've all been pretty inactive in the world of SED-ML lately
(and the community at large is relatively inactive). I know we should
have already had an election with Sven and Ion's terms completing at
the end of 2016, but we missed that one :)

Who will be at HARMONY this June in Seattle? I'll be there. Will there
be enough of us to have an editors meeting? or at least to cut down on
the time zones a meeting would need to cover? Could be a good
opportunity to summarise where the community is at and where we are
going and maybe get the cycling of SED-ML editors back in line with
the other COMBINE standards?

Or should we try and have an election prior to HARMONY? there is
probably just enough time if we get things underway soon...

Regardless, we should also be thinking about and proposing sessions
for HARMONY. Given the current state of things, my preference is for
some hacking sessions to see if we can get SED-ML implementation to
catch up to the L1V3 specification draft. And also on a refresh of the
website and code repositories.


Cheers,
David.

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Re: [sed-ml-editors] [all-sbml-editors] COMBINE 2016 draft schedule

[Chris M. <my...@ec...>]

Excellent.  See you there.

Chris

> On Aug 27, 2016, at 2:31 PM, Lucian Smith <luc...@gm...> wrote:
> 
> I'll be there in person!  Let's keep the schedule as it is for now.
> 
> 
> On Aug 27, 2016 12:34 PM, "Chris Myers" <my...@ec... <mailto:my...@ec...>> wrote:
> Perhaps but isn’t L3V2 pretty set at this point.  Isn’t this more of an information session?  It’s up to you.  I’m not sure we will keep the arrays breakout.
> 
> So, are you dialing in or going to be in Newcastle?
> 
> Chris
> 
>> On Aug 26, 2016, at 11:30 PM, Lucian Smith <luc...@gm... <mailto:luc...@gm...>> wrote:
>> 
>> Ha!  The L3v2 session should probably come at the beginning of the week, since I anticipate/hope there'll be followup discussion for the rest of the conference.  Maybe that'll just be a good time to catch up with the SED-ML group, since that session should *also* probably come near the beginning of the week, for the same reason.
>> 
>> Unfortunately, Herbert ran out of funding for me, so I only have volunteer time to work on Antimony at this point, which is going to mostly have to focus on bugfixing or updating to new OS versions, etc.  Maybe someday!  It's the same reason I've had zero time to work on anything SED-ML related, too, unfortunately.
>> 
>> -Lucian
>> 
>> On Fri, Aug 26, 2016 at 9:49 PM, Chris Myers <my...@ec... <mailto:my...@ec...>> wrote:
>> You could swap SBML L3V2 into the slot currently with SBML Arrays/Dynamic.  We can cancel that session as it was mostly going to be another attempt to convince you to hack it into Antimony :-).  Would that work? 
>> 
>> Are you going to be in Newcastle?
>> 
>> Chris
>> 
>>> On Aug 26, 2016, at 5:44 PM, Lucian Smith <luc...@gm... <mailto:luc...@gm...>> wrote:
>>> 
>>> I'm not sure if there's a good way to fix this, but currently, both SBML L3v2 and SED-ML L1v3 sessions are happening at the same time on Tuesday.  If possible, I would have liked to attend both, but I can catch up later with the SED-ML group if need be.
>>> 
>>> -Lucian
>>> 
>>> On Tue, Aug 23, 2016 at 1:59 PM, Paolo Zuliani <pao...@ne... <mailto:pao...@ne...>> wrote:
>>> Dear all,
>>> 
>>> The DRAFT agenda is available here  http://co.mbine.org/events/COMBINE_2016/agenda <http://co.mbine.org/events/COMBINE_2016/agenda>
>>> 
>>> Tomorrow I'll set the delegate page up.
>>> 
>>> Thanks,
>>> Paolo
>>> 
>>> >-----Original Message-----
>>> >From: Chris Myers [mailto:my...@ec... <mailto:my...@ec...>]
>>> >Sent: 22 August 2016 16:45
>>> >To: Paolo Zuliani
>>> >Cc: All SBML Editors past and present; The SBGN Editors internal mailing list;
>>> >Anil Wipat; Robert Sidney Cox III; com...@go... <mailto:com...@go...>; sbol-
>>> >ed...@go... <mailto:ed...@go...>; sed...@li... <mailto:sed...@li...>
>>> >Subject: Re: [all-sbml-editors] COMBINE 2016 draft schedule
>>> >
>>> >Thanks.  Probably we can post a link to the document as a tentative schedule.
>>> >
>>> >Also, could you list the registered attendees on the website?  You can see
>>> >how I did it last year on my page.  I updated every few days to make sure
>>> >people could see an updated list of who is coming.  Did you ever find Martin’s
>>> >registration?  We need to make sure we are not losing any.
>>> >
>>> >Thanks,
>>> >
>>> >Chris
>>> >
>>> >> On Aug 22, 2016, at 9:29 AM, Paolo Zuliani <pao...@ne... <mailto:pao...@ne...>>
>>> >wrote:
>>> >>
>>> >> Many thanks Chris. I've filled Thursday's morning free 9.15 slot, so now we
>>> >have a full program - updated schedule attached.
>>> >>
>>> >> Thanks,
>>> >> Paolo
>>> >>
>>> >>
>>> >> -----Original Message-----
>>> >> From: Chris Myers [mailto:my...@ec... <mailto:my...@ec...>]
>>> >> Sent: 19 August 2016 14:00
>>> >> To: All SBML Editors past and present <all...@ca... <mailto:all...@ca...>>
>>> >> Cc: Paolo Zuliani <pao...@ne... <mailto:pao...@ne...>>; The SBGN Editors
>>> >internal mailing list <sbg...@li... <mailto:sbg...@li...>>; Anil Wipat
>>> ><ani...@ne... <mailto:ani...@ne...>>; Robert Sidney Cox III
>>> ><si...@ce... <mailto:si...@ce...>>; com...@go... <mailto:com...@go...>;
>>> >sbo...@go... <mailto:sbo...@go...>; sed...@li... <mailto:sed...@li...>
>>> >> Subject: Re: [all-sbml-editors] COMBINE 2016 draft schedule
>>> >>
>>> >> Hi,
>>> >>
>>> >> I’ve added the SED-ML sessions, and I’ve made a few other changes based
>>> >on other constraints that I’m aware of.  We are still missing SBGN sessions.
>>> >Falk or any of the SBGN editors want to suggest what to add for these?  Also,
>>> >all group editors should provide leaders for each breakout session.
>>> >>
>>> >> Comments?
>>> >>
>>> >> Chris
>>> >>
>>> >> --
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>>> >> To view this discussion on the web, visit
>>> >https://groups.google.com/d/msgid/combine- <https://groups.google.com/d/msgid/combine->
>>> >coord/AM4PR07MB1332A36204421EF5F40F077DA9E80%40AM4PR07MB1332.e
>>> >urprd07.prod.outlook.com <http://urprd07.prod.outlook.com/>.
>>> >> For more options, visit https://groups.google.com/d/optout <https://groups.google.com/d/optout>.
>>> >> <COMBINE 2016_Schedule.xlsx>
>>> 
>>> ------------------------------------------------------------------------------
>>> _______________________________________________
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>>> sed...@li... <mailto:sed...@li...>
>>> https://lists.sourceforge.net/lists/listinfo/sed-ml-editors <https://lists.sourceforge.net/lists/listinfo/sed-ml-editors>
>>> 
>>> 
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>> 
>> 
>> 
>> -- 
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>> To unsubscribe from this group and stop receiving emails from it, send an email to com...@go... <mailto:com...@go...>.
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>