Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on.

Xmipp is a well-known package in the EM image processing. It is integrated into Scipion and contains the algorithms in the core libraries and command line programs.

Project Samples

Play Video Project in Tree View Spider filter Form Particles in Gallery View CTF re-calculation Filter Wizard

Project Activity

See All Activity >

Categories

Bio-Informatics, Data Visualization, Information Analysis, Image Processing

License

GNU General Public License version 2.0 (GPLv2)

Follow scipion-xmipp

scipion-xmipp Web Site

nel_h2
Gen AI apps are built with MongoDB Atlas Icon
Gen AI apps are built with MongoDB Atlas

The database for AI-powered applications.

MongoDB Atlas is the developer-friendly database used to build, scale, and run gen AI and LLM-powered apps—without needing a separate vector database. Atlas offers built-in vector search, global availability across 115+ regions, and flexible document modeling. Start building AI apps faster, all in one place.
Start Free
Rate This Project
Login To Rate This Project

User Ratings

5.0 out of 5 stars
★★★★★
★★★★
★★★
★★
★
1
0
0
0
0
ease 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
features 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
design 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
support 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5

User Reviews

Filter Reviews:
All
  • tfileme Posted 2013-05-13
    Scipion works perfectly.
    1 user found this review helpful.
Read more reviews >

Additional Project Details

Operating Systems

Linux

Intended Audience

Science/Research

User Interface

Java Swing, Tk, Web-based

Programming Language

C++, Java, Python

Related Categories

Python Bio-Informatics Software, Python Data Visualization Software, Python Information Analysis Software, Python Image Processing Software, C++ Bio-Informatics Software, C++ Data Visualization Software, C++ Information Analysis Software, C++ Image Processing Software, Java Bio-Informatics Software, Java Data Visualization Software, Java Information Analysis Software, Java Image Processing Software

Registered

2010-04-30
Report inappropriate content