#463 test_sbml_sbml_run test failure

[Antonio Trande]

Hi all.

test_sbml_sbml_run test is failing when i compile libsbml on fedora 29 (devel branch, GCC 8.1.1, libsbml 5.17.0, full build log):

test 22
      Start 22: test_sbml_sbml_run
22: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test/test_sbml_sbml
22: Environment variables: 
22:  srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test
22: Test timeout computed to be: 3000
22: Running suite(s): ReadSBML
22:  SBMLValidator API
22:  RenameIDs
22:  RemoveFromParent
22:  GetMultipleObjects
22:  WriteSBML
22:  WriteL3SBML
22:  WriteL3V2SBML
22:  AlgebraicRule
22:  AssignmentRule
22:  Compartment
22:  L3_Compartment
22:  Compartment_newSetters
22:  CompartmentType
22:  CompartmentType_newSetters
22:  CompartmentVolumeRule
22:  Constraint
22:  Constraint_newSetters
22:  Delay
22:  Event
22:  L3_Event
22:  Event_newSetters
22:  EventAssignment
22:  EventAssignment_newSetters
22:  FunctionDefinition
22:  FunctionDefinition_newSetters
22:  InitialAssignment
22:  InitialAssignment_newSetters
22:  KineticLaw
22:  KineticLaw_newSetters
22:  L3_KineticLaw
22:  ListOf
22:  Model
22:  L3_Model
22:  Model_newSetters
22:  ModifierSpeciesReference
22:  Parameter
22:  L3_Parameter
22:  L3_LocalParameter
22:  Parameter_newSetters
22:  ParameterRule
22:  Priority
22:  RateRule
22:  Reaction
22:  L3_Reaction
22:  Reaction_newSetters
22:  Rule
22:  Rule_newSetters
22:  SBase
22:  SBase_newSetters
22:  Species
22:  L3_Species
22:  Species_newSetters
22:  SpeciesReference
22:  L3_SpeciesReference
22:  SpeciesReference_newSetters
22:  SpeciesConcentrationRule
22:  SpeciesType
22:  SpeciesType_newSetters
22:  StoichiometryMath
22:  Trigger
22:  L3Trigger
22:  Unit
22:  L3_Unit
22:  Unit_newSetters
22:  UnitDefinition
22:  UnitDefinition_newSetters
22:  UnitKind
22:  CopyAndClone
22:  SBMLConvert
22:  SBMLConvertStrict
22:  SBMLConvertFromL3V2
22:  SBMLDocument
22:  SBMLError
22:  test-data/l1v1-branch.xml
22:  test-data/l1v1-units.xml
22:  test-data/l1v1-rules.xml
22:  test-data/l1v1-minimal.xml
22:  test-data/l2v1-assignment.xml
22:  test-data/l2v2-newComponents.xml
22:  test-data/l2v3-all.xml
22:  test-data/l2v4-new.xml
22:  test-data/l3v1-new.xml
22:  test-data/l2v5-all.xml
22:  test-data/l3v2-all.xml
22:  test-data/l3v2-no-model.xml
22:  test-data/l3v2-empty-lo-1.xml
22:  test-data/l3v2-empty-lo-2.xml
22:  test-data/l3v2-empty-math.xml
22:  test-data/l3v2-empty-event.xml
22:  test-data/l3v2-empty-event2.xml
22:  ConsistencyChecks
22:  ParentObject
22:  AncestorObject
22:  InternalConsistencyChecks
22:  HasReqdAtt
22:  HasReqdElements
22:  SBMLNamespaces
22:  SyntaxChecker
22:  SBMLConstructorException
22:  SBMLTransforms
22:  GetMultipleObjects
22:  LevelCompatibility
22:  SBaseIdName
22:  Generic Attribute Functions
22: 99%: Checks: 1730, Failures: 1, Errors: 0
22: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAttributeFunctions.cpp:325:F:Generic Attribute Functions:test_Attributes_Compartment_spatialDimensions:0: Assertion 'value == 0' failed
22/65 Test #22: test_sbml_sbml_run .....................***Failed    0.93 sec

[Antonio Trande]

This test looks failed on i386 architecture only.

[Sarah Keating]

Hi Antonio

Hopefully this is fixed by commit http://sourceforge.net/p/sbml/code/25373

Sarah

[Antonio Trande]

Hi Sarah.

Test fixed; thanks.