Menu
▾
▴
[Sashimi-commit] SF.net SVN: sashimi:[9474] trunk/trans_proteomic_ pipeline/html/ref/unimod.json
|
From: <rea...@us...> - 2026-02-26 00:18:00
|
Revision: 9474
http://sourceforge.net/p/sashimi/code/9474
Author: real_procopio
Date: 2026-02-26 00:17:57 +0000 (Thu, 26 Feb 2026)
Log Message:
-----------
Latest Unimod data, up to id=2147
Modified Paths:
--------------
trunk/trans_proteomic_pipeline/html/ref/unimod.json
Modified: trunk/trans_proteomic_pipeline/html/ref/unimod.json
===================================================================
--- trunk/trans_proteomic_pipeline/html/ref/unimod.json 2026-02-25 18:09:39 UTC (rev 9473)
+++ trunk/trans_proteomic_pipeline/html/ref/unimod.json 2026-02-26 00:17:57 UTC (rev 9474)
@@ -1415,6 +1415,16 @@
],
"altst": []
},
+ "b-type-ion": {
+ "recid": "2132",
+ "_iscommon": false,
+ "fname": "Dehydration of C-terminus as reaction inside the mass spectrometer",
+ "delta": "-18.010565",
+ "sites": [],
+ "altst": [
+ "C-term"
+ ]
+ },
"Cys->Oxoalanine": {
"recid": "402",
"_iscommon": false,
@@ -1469,6 +1479,16 @@
"N"
]
},
+ "z-type-ion": {
+ "recid": "2143",
+ "_iscommon": false,
+ "fname": "Ammonia loss from N-terminus as reaction inside the mass spectrometer",
+ "delta": "-17.026549",
+ "sites": [],
+ "altst": [
+ "N-term"
+ ]
+ },
"Met->Asn": {
"recid": "1149",
"_iscommon": false,
@@ -1988,6 +2008,16 @@
"V"
]
},
+ "Dehydromethionine": {
+ "recid": "2144",
+ "_iscommon": false,
+ "fname": "Intramolecular cyclization product of N-terminal methionine, forming a five-membered azasulfonium ion where the sulfur atom bonds to the amine group",
+ "delta": "-2.01565",
+ "sites": [],
+ "altst": [
+ "M"
+ ]
+ },
"Met->Glu": {
"recid": "1145",
"_iscommon": false,
@@ -2079,6 +2109,16 @@
"E"
]
},
+ "c-type-ion": {
+ "recid": "2141",
+ "_iscommon": false,
+ "fname": "Cleavage at the N atom from the N+1 residue as reaction inside the mass spectrometer",
+ "delta": "-0.984016",
+ "sites": [],
+ "altst": [
+ "C-term"
+ ]
+ },
"Glu->pyro-Glu+Methyl:2H(2)13C(1)": {
"recid": "1827",
"_iscommon": false,
@@ -2119,6 +2159,16 @@
"K"
]
},
+ "Cys->fGly-diol": {
+ "recid": "2129",
+ "_iscommon": false,
+ "fname": "formylglycinediol, activated in sulfatases",
+ "delta": "0.017759",
+ "sites": [],
+ "altst": [
+ "C"
+ ]
+ },
"Gln->Lys": {
"recid": "631",
"_iscommon": false,
@@ -2621,6 +2671,16 @@
"E"
]
},
+ "Label:2H(8)": {
+ "recid": "2146",
+ "_iscommon": false,
+ "fname": "SILAC: Lysine_D8",
+ "delta": "8.050214",
+ "sites": [],
+ "altst": [
+ "K"
+ ]
+ },
"Lys->His": {
"recid": "1136",
"_iscommon": false,
@@ -3250,6 +3310,17 @@
"C-term"
]
},
+ "Methyl:13C(1)2H(2)": {
+ "recid": "2140",
+ "_iscommon": false,
+ "fname": "Heavy-Methyl:13C(1)2H(2)",
+ "delta": "17.031558",
+ "sites": [],
+ "altst": [
+ "K",
+ "N-term"
+ ]
+ },
"Methyl:2H(3)": {
"recid": "298",
"_iscommon": false,
@@ -3567,6 +3638,16 @@
"C"
]
},
+ "x-type-ion": {
+ "recid": "2142",
+ "_iscommon": false,
+ "fname": "Cleavage at the carbonyl from the N-1 residue as reaction inside the mass spectrometer",
+ "delta": "25.979265",
+ "sites": [],
+ "altst": [
+ "N-term"
+ ]
+ },
"His->Tyr": {
"recid": "581",
"_iscommon": false,
@@ -5437,6 +5518,16 @@
"W"
]
},
+ "Cys->Ser-O-sulfate": {
+ "recid": "2131",
+ "_iscommon": false,
+ "fname": "Serine O-sulfate",
+ "delta": "63.979659",
+ "sites": [],
+ "altst": [
+ "C"
+ ]
+ },
"Val->Tyr": {
"recid": "1223",
"_iscommon": false,
@@ -5835,6 +5926,16 @@
"K"
]
},
+ "Cys->sulfo-fGly-dio": {
+ "recid": "2130",
+ "_iscommon": false,
+ "fname": "Sulphated formylglycinediol, activated in sulfatases",
+ "delta": "78.966748",
+ "sites": [],
+ "altst": [
+ "C"
+ ]
+ },
"Delta:Se(1)": {
"recid": "423",
"_iscommon": false,
@@ -7715,6 +7816,16 @@
"K"
]
},
+ "imidazolone": {
+ "recid": "2147",
+ "_iscommon": false,
+ "fname": "imidazolone from 3-DG",
+ "delta": "144.042259",
+ "sites": [],
+ "altst": [
+ "R"
+ ]
+ },
"iTRAQ4plex115": {
"recid": "533",
"_iscommon": false,
@@ -8383,6 +8494,18 @@
"N-term"
]
},
+ "Phosphocholine": {
+ "recid": "2139",
+ "_iscommon": false,
+ "fname": "Serine/Threonine/Tyrosine of a protein becomes posttranslationally modified with a phosphocholine moiety.",
+ "delta": "165.05548",
+ "sites": [],
+ "altst": [
+ "T",
+ "S",
+ "Y"
+ ]
+ },
"Tween20": {
"recid": "1834",
"_iscommon": false,
@@ -8654,6 +8777,21 @@
"C"
]
},
+ "PnTAG": {
+ "recid": "2135",
+ "_iscommon": false,
+ "fname": "6-Phosphonohexanoylation",
+ "delta": "178.039496",
+ "sites": [],
+ "altst": [
+ "Y",
+ "T",
+ "S",
+ "N-term",
+ "N-term",
+ "K"
+ ]
+ },
"Galactosyl": {
"recid": "907",
"_iscommon": false,
@@ -9261,12 +9399,13 @@
"delta": "224.152478",
"sites": [],
"altst": [
+ "S",
"H",
"N-term",
"N-term",
"K",
- "S",
- "T"
+ "T",
+ "Y"
]
},
"Brij58": {
@@ -9313,7 +9452,8 @@
"T",
"S",
"H",
- "N-term"
+ "N-term",
+ "Y"
]
},
"Xlink:DSPP[226]": {
@@ -9424,7 +9564,8 @@
"T",
"S",
"H",
- "N-term"
+ "N-term",
+ "Y"
]
},
"PyridoxalPhosphateH2": {
@@ -9437,6 +9578,21 @@
"K"
]
},
+ "DMA-PEG3": {
+ "recid": "2136",
+ "_iscommon": false,
+ "fname": "DimethylaminoPEG3ylation",
+ "delta": "231.147058",
+ "sites": [],
+ "altst": [
+ "K",
+ "N-term",
+ "N-term",
+ "S",
+ "T",
+ "Y"
+ ]
+ },
"PropylNAGthiazoline": {
"recid": "514",
"_iscommon": false,
@@ -10029,7 +10185,8 @@
"N-term",
"N-term",
"K",
- "T"
+ "T",
+ "Y"
]
},
"IGBP": {
@@ -10163,7 +10320,8 @@
"T",
"S",
"H",
- "N-term"
+ "N-term",
+ "Y"
]
},
"PhosphoCytidine": {
@@ -10526,6 +10684,16 @@
"K"
]
},
+ "Desthiobiotin-Phenol": {
+ "recid": "2127",
+ "_iscommon": false,
+ "fname": "Desthiobiotin-Phenol",
+ "delta": "331.189592",
+ "sites": [],
+ "altst": [
+ "Y"
+ ]
+ },
"LG-lactam-K": {
"recid": "503",
"_iscommon": false,
@@ -11007,6 +11175,16 @@
"K"
]
},
+ "HCCA-Lys": {
+ "recid": "2138",
+ "_iscommon": false,
+ "fname": "Lysine labelled with HCCA tag",
+ "delta": "412.211056",
+ "sites": [],
+ "altst": [
+ "K"
+ ]
+ },
"PEO-Iodoacetyl-LC-Biotin": {
"recid": "20",
"_iscommon": false,
@@ -11419,6 +11597,16 @@
"C"
]
},
+ "Cys-vinyl sulfone amine probe addition": {
+ "recid": "2128",
+ "_iscommon": false,
+ "fname": "Michael addition of a vinyl sulfone amine desthiobiotin probe to cysteine",
+ "delta": "478.24612",
+ "sites": [],
+ "altst": [
+ "C"
+ ]
+ },
"EQIGG": {
"recid": "846",
"_iscommon": false,
@@ -16783,9 +16971,9 @@
}
},
"info": {
- "datetime": "2024-08-14 21:38:47",
- "generator": "./unimodxml2json.py",
+ "datetime": "2026-02-25 14:03:11",
+ "generator": "/users/lmendoza/bin/UNIMOD/./unimodxml2json.py",
"source": "/proteomics/lmendoza/reference/unimod.xml",
- "last_id": "2126"
+ "last_id": "2147"
}
}
\ No newline at end of file
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
