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From: Eric D. <ede...@us...> - 2009-06-12 17:32:49
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Date: Friday June 12, 2009 @ 17:31 Author: edeutsch http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv12885 Modified Files: lastID.txt psi-ms.obo Log Message: Added AB SCIEX TOF/TOF Series Explorer Software term |
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From: Marc S. <mar...@us...> - 2009-06-12 09:02:19
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Date: Friday June 12, 2009 @ 9:00 Author: marc_sturm http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv10790/controlledVocabulary Modified Files: psi-ms.obo Log Message: Fixed wrong parent term name |
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From: Eric D. <ede...@us...> - 2009-06-11 19:34:53
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Date: Thursday June 11, 2009 @ 19:34 Author: edeutsch http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv10901 Modified Files: lastID.txt psi-ms.obo Log Message: added terms: name: AB SCIEX TOF/TOF nativeID format name: AB SCIEX TOF/TOF database name: AB SCIEX TOF/TOF 5800 |
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From: Matt C. <ch...@us...> - 2009-06-11 15:25:37
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Date: Thursday June 11, 2009 @ 15:25 Author: chambm http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv12410/psi-ms/mzML/controlledVocabulary Modified Files: lastID.txt psi-ms.obo Log Message: - fixed duplicate accession from previous commit - added key-value relationships to specify which binary data types are valid for which binary data arrays - improved definitions for binary data types - added new binary data type for null-terminated ASCII strings |
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From: Andreas B. <and...@us...> - 2009-06-11 04:23:45
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Date: Thursday June 11, 2009 @ 4:22 Author: andreas_bertsch http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv5137 Modified Files: lastID.txt psi-ms.obo Log Message: added terms Mascot Parser |
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From: Andreas B. <and...@us...> - 2009-06-11 03:47:01
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Date: Thursday June 11, 2009 @ 3:46 Author: andreas_bertsch http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv2087 Modified Files: lastID.txt psi-ms.obo Log Message: added terms for xtandem OMSSA and SpectraST |
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From: Estell <psi...@li...> - 2009-06-10 21:53:50
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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"> <html xmlns="http://www.w3.org/1999/xhtml"> <head> <meta http-equiv="Content-Type" content="text/html;charset=ISO-8859-1"> <title>Aonuue Inc</title> <meta content="Olyu Nudayq Esamixeg" name="generator" /> </head> <body> <table border='0' cellspacing='0' cellpadding='0' width='100%' height='100%' bgcolor="#97d8ec"> <tr> <td style="padding:20px 0;"><table border="0" align="center" width="600" cellpadding="0" cellspacing="0" bgcolor="#FFFFFF"> <tr> <td style="text-align: center; color: #358DA8; font-size: small"> In some cases problems with graphics occur<br /> <a href="http://arq.ribpinor.cn/?qky=990D76&orq=990d760c2f7">Click here</a> to view the updated version with images<br /> </td> </tr> <tr> <td style='padding:10px 40px 0 40px;font-size:8pt; font-family:Tahoma, Arial, Helvetica, sans-serif;color:#1e4e6b;line-height:1.25em;'><P> Dear psi...@li..., </P> <P> <a href="http://lqhy.ribpinor.cn/?fug=990D76&uf=990d760c2f7" target="_self"> <img border="0" alt="If your mail service fails to show graphic images, proceed here, please" src="http://any.ribpinor.cn/spacer.gif" /></a></P> <P>Prosonic Estell <BR />President </P> </td> </tr> <tr> <td align="center" bgcolor="#97d8ec" style="padding:15px 0; font-size:8pt; font-family:Tahoma, Arial, Helvetica, sans-serif;color:#358da8;"> Click to <a href="http://ytoz.ribpinor.cn/?jr=990D76&fuu=990d760c2f7" style="font-size:8pt;text-decoration:underline;color:#358da8;"> update your e-mail preferences</a> or to <a href="http://cjjqry.ribpinor.cn/?fij=990D76&as=990d760c2f7" style="font-size:8pt;text-decoration:underline;color:#358da8;"> unsubscribe</a>.<br> This e-mail was sent by Qfahq, 66 Ajpukyke St., Sqocq, PP 84307 USA.</td> </tr> </table></td> </tr> </table> </body> </html> |
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From: Eric D. <ede...@us...> - 2009-06-08 21:13:02
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Date: Monday June 8, 2009 @ 21:12 Author: edeutsch http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/document Update of /cvsroot/psidev/psi/psi-ms/mzML/document In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv17317 Modified Files: mzML1.1.0_specificationDocument.doc Log Message: Updated to 1.1.0.1 by tidying up a few loose documentation ends: - Relationships to other standards - profile vs. centroid spectra - minor versioning number inconsistencies |
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From: Eric D. <ede...@us...> - 2009-06-04 01:18:57
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Date: Thursday June 4, 2009 @ 1:18 Author: edeutsch http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/schema Update of /cvsroot/psidev/psi/psi-ms/mzML/schema In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv11994 Modified Files: mzML1.1.0.xsd Log Message: removed whitespace inside the selector xpath attrbiute values which causes some implementations problems. |
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From: Andreas B. <and...@us...> - 2009-05-28 12:40:02
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Date: Thursday May 28, 2009 @ 12:39 Author: andreas_bertsch http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv8151 Modified Files: psi-ms.obo Log Message: fixed wrong length unit descriptor in has_units relationship |
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From: Matt C. <ch...@us...> - 2009-05-27 18:08:26
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Date: Wednesday May 27, 2009 @ 18:07 Author: chambm http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv2128/psi-ms/mzML/controlledVocabulary Modified Files: lastID.txt psi-ms.obo Log Message: - added chromatogram types for SIM, SRM, and CRM (the last one is obsolete by design) - fixed space at the end of an id - fixed weird import in the obo header |
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From: Marc S. <mar...@us...> - 2009-05-26 11:36:27
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Date: Tuesday May 26, 2009 @ 11:34 Author: marc_sturm http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv8605/controlledVocabulary Modified Files: psi-ms.obo Log Message: fixed wrong parent term names |
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From: Andreas B. <and...@us...> - 2009-05-22 15:47:55
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Date: Friday May 22, 2009 @ 15:47 Author: andreas_bertsch http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv24451 Modified Files: psi-ms.obo Log Message: readded term 1001213, whcih somehow got lost; obsoleted it and sent to purgatory |
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From: Andreas B. <and...@us...> - 2009-05-22 15:10:03
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Date: Friday May 22, 2009 @ 15:09 Author: andreas_bertsch http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv19828 Modified Files: psi-ms.obo lastID.txt Log Message: added taxonomy terms (fixed issue 50); moved role type to contact person attribute; moved unknown modification under newly created peptide modification details |
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From: Lennart M. <mar...@us...> - 2009-05-21 13:16:58
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Date: Thursday May 21, 2009 @ 12:14 Author: martlenn http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/schema Update of /cvsroot/psidev/psi/psi-ms/mzML/schema In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv14083 Modified Files: mzML1.1.0.xsd Log Message: Removed superfluous ScanWindowType definition. |
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From: Marc S. <mar...@us...> - 2009-05-20 11:38:04
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Date: Wednesday May 20, 2009 @ 11:37 Author: marc_sturm http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/schema Update of /cvsroot/psidev/psi/psi-ms/mzML/schema In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv20648/schema Modified Files: mzML1.1.0.xsd Log Message: Fixed missing scan window elements |
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From: Eric D. <ede...@us...> - 2009-05-19 18:41:51
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Date: Tuesday May 19, 2009 @ 18:41 Author: edeutsch http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/document Update of /cvsroot/psidev/psi/psi-ms/mzML/document In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv26111 Modified Files: mzML1.1.0_specificationDocument.doc Log Message: added missed changes from previous commit |
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From: Eric D. <ede...@us...> - 2009-05-19 18:29:33
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Date: Tuesday May 19, 2009 @ 18:29 Author: edeutsch http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/document Update of /cvsroot/psidev/psi/psi-ms/mzML/document In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv24765 Modified Files: mzML1.1.0_specificationDocument.doc Log Message: Updated to RC6 |
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From: Eric D. <ede...@us...> - 2009-05-19 17:50:25
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Date: Tuesday May 19, 2009 @ 17:50 Author: edeutsch http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/schema Update of /cvsroot/psidev/psi/psi-ms/mzML/schema In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv19509 Modified Files: mzML1.1.0.xsd Log Message: Made spectrumList optional. Added structure under chromatogram. Fixed extra space after | in xs:selector xpath. Many unfortunate formatting adjustments due to different writer. VS: Committing in . |
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From: Eric D. <ede...@us...> - 2009-05-19 17:45:45
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Date: Tuesday May 19, 2009 @ 17:45 Author: edeutsch http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv19048 Modified Files: psi-ms.obo Log Message: Added large number of terms for TraML |
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From: Fredrik L. <fle...@us...> - 2009-05-19 07:26:58
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Date: Tuesday May 19, 2009 @ 7:26 Author: flevander http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv1788 Modified Files: psi-ms.obo Log Message: Changed MS1 description and spelling of unknown |
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From: Fredrik L. <fle...@us...> - 2009-05-19 07:10:34
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Date: Tuesday May 19, 2009 @ 7:10 Author: flevander http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv32414 Modified Files: psi-ms.obo Log Message: Obsoleted MGF SCANS and MGF RAWSCANS |
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From: Andreas B. <and...@us...> - 2009-05-18 22:32:19
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Date: Monday May 18, 2009 @ 22:32 Author: andreas_bertsch http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv23235 Modified Files: psi-ms.obo Log Message: obsoleted terms MS:1001061 (neutral loss) and MS:1001416 (spectrum titel), replaced by their MS pedents MS:1000336 and MS:1000796, respectively. |
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From: Andreas B. <and...@us...> - 2009-05-18 11:51:12
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Date: Monday May 18, 2009 @ 11:51 Author: andreas_bertsch http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv10676 Modified Files: lastID.txt psi-ms.obo Log Message: major changes in PI part: see minutes pi-telcon May, 14th, some issues remain unsolved of the 2009-05-07 telcon |
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From: Marc S. <mar...@us...> - 2009-05-13 07:20:04
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Date: Wednesday May 13, 2009 @ 7:19 Author: marc_sturm http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/mzML/controlledVocabulary Update of /cvsroot/psidev/psi/psi-ms/mzML/controlledVocabulary In directory ddv4jf1.ch3.sourceforge.com:/tmp/cvs-serv1223/controlledVocabulary Modified Files: psi-ms.obo Log Message: Added fraction identifier terms |
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