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From: Buildmaster <bui...@la...> - 2022-06-24 10:05:23
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Build ProteoWizard::Skyline master and PRs (Windows x86_64 debug, with code coverage) #3690 (523965bd6ac2609f533afc1c8eb85ddb649aae09) failed Tests failed: 1 (1 new), passed: 843. Agent: pwiz-vs-2022-i-03f3fcb17d0cbbe54 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1871351&buildTypeId=bt210 Failed Tests Summary: Newly failed tests (1 test, alphabetically ordered) ================================================================== VSTest: pwiz.SkylineTestFunctional.EditNoteTest.TestEditNote Newly failed tests details (naturally ordered) ================================================================== VSTest: pwiz.SkylineTestFunctional.EditNoteTest.TestEditNote (new) ================= Assert.Fail failed. ------------------------------------------------------ System.IO.IOException: The process cannot access the file 'CE_Vantage_15mTorr_scheduled_mini.skyd' because it is being used by another process. at System.IO.Directory.DeleteHelper(String fullPath, String userPath, Boolean recursive, Boolean throwOnTopLevelDirectoryNotFound, WIN32_FIND_DATA& data) at System.IO.Directory.Delete(String fullPath, String userPath, Boolean recursive, Boolean checkHost) at pwiz.SkylineTestUtil.TestFilesDir.<>c__DisplayClass26_0.<Dispose>b__1() in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFilesDir.cs:line 232 at pwiz.Skyline.Util.Helpers.TryTwice(Action action, Int32 loopCount, Int32 milliseconds, String hint) in Z:\pwiz\pwiz_tools\Skyline\Util\Util.cs:line 1891 at pwiz.SkylineTestUtil.TestFilesDir.Dispose() in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFilesDir.cs:line 232 at pwiz.SkylineTestUtil.AbstractFunctionalTest.RunFunctionalTest(String defaultUiMode) in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 1320 ------------------------------------------------------ at pwiz.SkylineTestUtil.AbstractFunctionalTest.RunFunctionalTest(String defaultUiMode) in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 1352 at pwiz.SkylineTestFunctional.EditNoteTest.TestEditNote() in Z:\pwiz\pwiz_tools\Skyline\TestFunctional\EditNoteTest.cs:line 41 ------- Stdout: ------- Streams left open: 2842082. System.IO.FileStream Debug Trace: Encountered the following exception on attempt 1 of 4: [UTC: 2022-06-24T08:49:26 Test: TestEditNote PID: 924 Thread: 309)] Access to the path 'Z:\pwiz\pwiz_tools\Skyline\TestResults\Administrator_EC2AMAZ-HH9KVFB 2022-06-24 07_53_13\EditNoteTest' is denied. [UTC: 2022-06-24T08:49:26 Test: TestEditNote PID: 924 Thread: 309)] We're running under ReSharper analysis, which may throw off timing - adding some extra sleep time [UTC: 2022-06-24T08:49:26 Test: TestEditNote PID: 924 Thread: 309)] Sleeping 3000 ms then retrying... [UTC: 2022-06-24T08:49:26 Test: TestEditNote PID: 924 Thread: 309)] Encountered the following exception on attempt 2 of 4: [UTC: 2022-06-24T08:49:29 Test: TestEditNote PID: 924 Thread: 309)] Access to the path 'Z:\pwiz\pwiz_tools\Skyline\TestResults\Administrator_EC2AMAZ-HH9KVFB 2022-06-24 07_53_13\EditNoteTest' is denied. [UTC: 2022-06-24T08:49:29 Test: TestEditNote PID: 924 Thread: 309)] We're running under ReSharper analysis, which may throw off timing - adding some extra sleep time [UTC: 2022-06-24T08:49:29 Test: TestEditNote PID: 924 Thread: 309)] Sleeping 4250 ms then retrying... [UTC: 2022-06-24T08:49:29 Test: TestEditNote PID: 924 Thread: 309)] Encountered the following exception on attempt 3 of 4: [UTC: 2022-06-24T08:49:33 Test: TestEditNote PID: 924 Thread: 309)] Access to the path 'Z:\pwiz\pwiz_tools\Skyline\TestResults\Administrator_EC2AMAZ-HH9KVFB 2022-06-24 07_53_13\EditNoteTest' is denied. [UTC: 2022-06-24T08:49:33 Test: TestEditNote PID: 924 Thread: 309)] We're running under ReSharper analysis, which may throw off timing - adding some extra sleep time [UTC: 2022-06-24T08:49:33 Test: TestEditNote PID: 924 Thread: 309)] Sleeping 5500 ms then retrying... [UTC: 2022-06-24T08:49:33 Test: TestEditNote PID: 924 Thread: 309)] Final attempt (4 of 4): [UTC: 2022-06-24T08:49:38 Test: TestEditNote PID: 924 Thread: 309)] Void WriteLine(System.String, Boolean) at Z:\pwiz\pwiz_tools\Skyline\Util\Util.cs(2294:21) Void TryTwice(System.Action, Int32, Int32, System.String) at Z:\pwiz\pwiz_tools\Skyline\Util\Util.cs(1889:13) Void Dispose() at Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFilesDir.cs(227:21) Void RunFunctionalTest(System.String) at Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs(1320:29) Void TestEditNote() at Z:\pwiz\pwiz_tools\Skyline\TestFunctional\EditNoteTest.cs(41:13) System.Object InvokeMethod(System.Object, System.Object[], System.Signature, Boolean) at (0:0) System.Object UnsafeInvokeInternal(System.Object, System.Object[], System.Object[]) at (0:0) System.Object Invoke(System.Object, System.Reflection.BindingFlags, System.Reflection.Binder, System.Object[], System.Globalization.CultureInfo) at (0:0) Microsoft.VisualStudio.TestTools.UnitTesting.TestMethodInvokerResult DefaultTestMethodInvoke(System.Object[]) at (0:0) Void RunTestMethod() at (0:0) Void ExecuteTest() at (0:0) Void Execute(Microsoft.VisualStudio.TestTools.TestTypes.Unit.UnitTestResult) at (0:0) Microsoft.VisualStudio.TestTools.Common.TestResult ExecuteSingleTest(Microsoft.VisualStudio.TestTools.TestTypes.Unit.UnitTestExecuter, Microsoft.VisualStudio.TestTools.TestTypes.Unit.UnitTestElement, Microsoft.VisualStudio.TestTools.Execution.ITestContext, Microsoft.VisualStudio.TestTools.TestTypes.Unit.UnitTestAdapterContext, Boolean) at (0:0) Microsoft.VisualStudio.TestTools.Common.TestResult Run(Microsoft.VisualStudio.TestTools.TestTypes.Unit.UnitTestElement, Microsoft.VisualStudio.TestTools.Execution.ITestContext, Boolean, Boolean) at (0:0) Encountered the following exception on attempt 1 of 4: [UTC: 2022-06-24T08:49:38 Test: TestEditNote PID: 924 Thread: 309)] The process cannot access the file 'CE_Vantage_15mTorr_scheduled_mini.skyd' because it is being used by another process. [UTC: 2022-06-24T08:49:38 Test: TestEditNote PID: 924 Thread: 309)] We're running under ReSharper analysis, which may throw off timing - adding some extra sleep time [UTC: 2022-06-24T08:49:38 Test: TestEditNote PID: 924 Thread: 309)] Sleeping 3000 ms then retrying... [UTC: 2022-06-24T08:49:38 Test: TestEditNote PID: 924 Thread: 309)] Encountered the following exception on attempt 2 of 4: [UTC: 2022-06-24T08:49:41 Test: TestEditNote PID: 924 Thread: 309)] The process cannot access the file 'CE_Vantage_15mTorr_scheduled_mini.skyd' because it is being used by another process. [UTC: 2022-06-24T08:49:41 Test: TestEditNote PID: 924 Thread: 309)] We're running under ReSharper analysis, which may throw off timing - adding some extra sleep time [UTC: 2022-06-24T08:49:41 Test: TestEditNote PID: 924 Thread: 309)] Sleeping 4250 ms then retrying... [UTC: 2022-06-24T08:49:41 Test: TestEditNote PID: 924 Thread: 309)] Encountered the following exception on attempt 3 of 4: [UTC: 2022-06-24T08:49:46 Test: TestEditNote PID: 924 Thread: 309)] The process cannot access the file 'CE_Vantage_15mTorr_scheduled_mini.skyd' because it is being used by another process. [UTC: 2022-06-24T08:49:46 Test: TestEditNote PID: 924 Thread: 309)] We're running under ReSharper analysis, which may throw off timing - adding some extra sleep time [UTC: 2022-06-24T08:49:46 Test: TestEditNote PID: 924 Thread: 309)] Sleeping 5500 ms then retrying... [UTC: 2022-06-24T08:49:46 Test: TestEditNote PID: 924 Thread: 309)] Final attempt (4 of 4): [UTC: 2022-06-24T08:49:51 Test: TestEditNote PID: 924 Thread: 309)] Void WriteLine(System.String, Boolean) at Z:\pwiz\pwiz_tools\Skyline\Util\Util.cs(2294:21) Void TryTwice(System.Action, Int32, Int32, System.String) at Z:\pwiz\pwiz_tools\Skyline\Util\Util.cs(1889:13) Void Dispose() at Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFilesDir.cs(227:21) Void RunFunctionalTest(System.String) at Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs(1320:29) Void TestEditNote() at Z:\pwiz\pwiz_tools\Skyline\TestFunctional\EditNoteTest.cs(41:13) System.Object InvokeMethod(System.Object, System.Object[], System.Signature, Boolean) at (0:0) System.Object UnsafeInvokeInternal(System.Object, System.Object[], System.Object[]) at (0:0) System.Object Invoke(System.Object, System.Reflection.BindingFlags, System.Reflection.Binder, System.Object[], System.Globalization.CultureInfo) at (0:0) Microsoft.VisualStudio.TestTools.UnitTesting.TestMethodInvokerResult DefaultTestMethodInvoke(System.Object[]) at (0:0) Void RunTestMethod() at (0:0) Void ExecuteTest() at (0:0) Void Execute(Microsoft.VisualStudio.TestTools.TestTypes.Unit.UnitTestResult) at (0:0) Microsoft.VisualStudio.TestTools.Common.TestResult ExecuteSingleTest(Microsoft.VisualStudio.TestTools.TestTypes.Unit.UnitTestExecuter, Microsoft.VisualStudio.TestTools.TestTypes.Unit.UnitTestElement, Microsoft.VisualStudio.TestTools.Execution.ITestContext, Microsoft.VisualStudio.TestTools.TestTypes.Unit.UnitTestAdapterContext, Boolean) at (0:0) Microsoft.VisualStudio.TestTools.Common.TestResult Run(Microsoft.VisualStudio.TestTools.TestTypes.Unit.UnitTestElement, Microsoft.VisualStudio.TestTools.Execution.ITestContext, Boolean, Boolean) at (0:0) Changes included (1 change) ==================================================== Change 523965bd6ac2609f533afc1c8eb85ddb649aae09 by ni...@pr... (5 files): Fix AssumptionException in PeptideChromInfoListCalculator.UpdateTransitonGroupRatios (#2135) Fixed error importing multi-injection replicates when some but not all of the precursors for a molecule have matching chromatograms in more than one result file per replicate (reported by Sarah, thanks to Nick) Fixed "File > Share" to strip out "Synchronized Integration" settings if targeted Skyline version did not support that feature. (not reported by anyone) Co-authored-by: Nicholas Shulman <ni...@uw...> see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1871351&buildTypeId=bt210 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-06-17 19:10:42
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Build ProteoWizard::ProteoWizard Publish Docker and Singularity images #47 successful Success. Agent: pwiz-linux-i-0734f461dac32051a Build results: https://teamcity.labkey.org/viewLog.html?buildId=1863256&buildTypeId=ProteoWizard_ProteoWizardPublishDockerAndSingularityImages ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-06-17 17:41:07
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Build ProteoWizard::ProteoWizard Publish Docker and Singularity images #45 failed Exit code 1 (Step: Load Docker image (Command Line)). Agent: pwiz-linux-i-08eee73ff53b0666e Build results: https://teamcity.labkey.org/viewLog.html?buildId=1862796&buildTypeId=ProteoWizard_ProteoWizardPublishDockerAndSingularityImages ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-06-17 17:05:45
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Build ProteoWizard::ProteoWizard Publish Docker and Singularity images #44 failed Exit code 1 (Step: Load Docker image (Command Line)). Agent: pwiz-linux-i-08eee73ff53b0666e Build results: https://teamcity.labkey.org/viewLog.html?buildId=1862776&buildTypeId=ProteoWizard_ProteoWizardPublishDockerAndSingularityImages ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-06-17 16:50:07
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Build ProteoWizard::Core Linux x86_64 debug #2298 (d01618444359c65bf3be6eb732a37709154b12f8) successful Tests passed: 245. Agent: pwiz-linux-i-08eee73ff53b0666e Build results: https://teamcity.labkey.org/viewLog.html?buildId=1862593&buildTypeId=bt72 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-06-17 16:48:01
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Build ProteoWizard::ProteoWizard Publish Docker and Singularity images #43 failed Exit code 1 (Step: Load Docker image (Command Line)) (new). Agent: pwiz-linux-i-0d2a0343480bc17ce Build results: https://teamcity.labkey.org/viewLog.html?buildId=1862594&buildTypeId=ProteoWizard_ProteoWizardPublishDockerAndSingularityImages ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-06-17 07:44:08
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Build ProteoWizard::Core Linux x86_64 debug #2297 (d01618444359c65bf3be6eb732a37709154b12f8) failed Tests failed: 1 (1 new), passed: 244. Agent: pwiz-linux-i-0aea330202648e905 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1862312&buildTypeId=bt72 Failed Tests Summary: Newly failed tests (1 test, alphabetically ordered) ================================================================== maxquant-yeast-wiff Newly failed tests details (naturally ordered) ================================================================== maxquant-yeast-wiff (new) ================= Blib command returned 256 Changes included (1 change) ==================================================== Change d01618444359c65bf3be6eb732a37709154b12f8 by mat...@gm... (12 files): Fix a few pwiz issues (#2125) - added ms levels to processingMethod for SpectrumList_PeakPicker when the levels are not simply "1-" - fixed error reading MassHunter Devices.xml with LF line endings - added scan time and precursor intensity for MS2 "EZ" lines - fixed error generating heatmap for Waters IMS data * fixed MS2 serialization using obsolete CV term * fixed underspecified library targets in CLI bindings causing runtime-debugging=on for Skyline not to build * removed runtime-debugging=off requirement for ChromatogramList_LockmassRefinerTest see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1862312&buildTypeId=bt72 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-06-04 09:38:00
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Build ProteoWizard::Skyline master and PRs (Windows x86_64 debug, with code coverage) #3638 (55ade558d9ce0865543c7b063f9ed3e691d47cc5) successful Tests passed: 837. Agent: pwiz-vs-2022-i-0561335cffea1c8a8 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1847415&buildTypeId=bt210 Changes included (1 change) ==================================================== Change 55ade558d9ce0865543c7b063f9ed3e691d47cc5 by mat...@gm... (4 files): Optimize finalization in MsDataFileImpl (#2111) * switched C# version to 8.0 in Directory.Build.props (the default interface members feature won't work though: https://stackoverflow.com/questions/56651472/does-c-sharp-8-support-the-net-framework) * moved Directory.Build.props to pwiz_tools directory so it covers all the .NET projects see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1847415&buildTypeId=bt210 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-06-03 10:47:10
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Build ProteoWizard::Skyline master and PRs (Windows x86_64 debug, with code coverage) #3631 (da6d3d1cd19b70924bafb1d94d3851f49a747daa) failed Tests passed: 837; percentage of method coverage 69.58 is 0.01 less than 69.59 in build #3619 (f1af2016e99afaf95f7fe7562e15c4cef7beec52). Agent: pwiz-vs-2022-i-0f04a6515adf2b1c2 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1845330&buildTypeId=bt210 Changes included (3 changes) ==================================================== Change da6d3d1cd19b70924bafb1d94d3851f49a747daa by mat...@gm... (1 file): Fix MSFragger download agreement (#2117) With the MSFragger 3.5 release it seems they tweaked the verification code a bit so a new post variable is needed. Reported by Mike Change b74f93026645b3d707f304e9004186a9f2c5da99 by ni...@pr... (2 files): Change the R version used by the TurnoveR external tool from 4.0.2 to 4.2.0 (#2116) Change 24b39bd02f6844be4da57c4eecfa96d8c4469189 by ni...@pr... (1 file): Add OFX.Core.Contracts.dll to ClickOnce installer. (#2115) Fixed error about missing "OFX.Core.Contracts.dll" when importing SCIEX 6500 QQQ wiff file (reported by Matt) (no, not that Matt, a different Matt on the support board) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1845330&buildTypeId=bt210 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-06-01 11:05:58
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Build ProteoWizard::Skyline master and PRs (Windows x86_64 debug, with code coverage) #3627 (9a8e200098c7c2df644be767fc4f28b5d8a422c0) failed Tests passed: 837; percentage of method coverage 69.573 is 0.016 less than 69.59 in build #3619 (f1af2016e99afaf95f7fe7562e15c4cef7beec52). Agent: pwiz-vs-2022-i-0d3eb8dcd3e454108 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1842507&buildTypeId=bt210 Changes included (4 changes) ==================================================== Change 9a8e200098c7c2df644be767fc4f28b5d8a422c0 by ni...@uw... (1 file): Revert "Add OFX.Core.Contracts.dll to ClickOnce installer." This reverts commit 5f23c5fdc6ab638e54d2f8579c87d21969e3621c. Change 5f23c5fdc6ab638e54d2f8579c87d21969e3621c by ni...@uw... (1 file): Add OFX.Core.Contracts.dll to ClickOnce installer. Fixed error about missing "OFX.Core.Contracts.dll" when importing SCIEX 6500 QQQ wiff file (reported by Matt) Change 2acd972f409f426344362b351e4bdf2895be88bb by 523...@us... (1 file): Fixed problem with downloading tools that have invalid URL characters in their identifiers (#2113) Change 3f8579240e1ded7114d7395c4d864c57f71207bb by bs...@pr... (1 file): Fix a race condition that tends to occur in DiaSearchTest.TestDiaSearchVariableWindows under code coverage test on TeamCity (#2101) Internal test issue, not reported by any user see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1842507&buildTypeId=bt210 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-05-29 09:36:56
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Build ProteoWizard::Skyline master and PRs (Windows x86_64 debug, with code coverage) #3621 (e2531420095959dec6115f509fc408c15fe03b2c) failed Tests passed: 837; percentage of method coverage 69.576 is 0.014 less than 69.59 in build #3619 (f1af2016e99afaf95f7fe7562e15c4cef7beec52) (new). Agent: pwiz-vs-2022-i-0b5e0391889995b93 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1840131&buildTypeId=bt210 Changes included (1 change) ==================================================== Change e2531420095959dec6115f509fc408c15fe03b2c by ni...@pr... (5 files): Fix clickonce installer error "The element 'assembly' has invalid child element 'SignedInfo'". (#2112) Fixed Skyline install problem ("failed to check for an update") (reported by Joerg) Remove Windows Vista and Windows 7 GUIDs from app manifest file. Fix inspired by this StackOverflow post: https://stackoverflow.com/questions/27106385/clickonce-manifest-has-invalid-children-but-xml-matches-old-published-manifest see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1840131&buildTypeId=bt210 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-05-29 07:19:32
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Build ProteoWizard::BiblioSpec subset source tarball #1346 (e2531420095959dec6115f509fc408c15fe03b2c) successful Success. Agent: pwiz-linux-i-0c18168bd7591e1a0 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1840136&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (1 change) ==================================================== Change e2531420095959dec6115f509fc408c15fe03b2c by ni...@pr... (5 files): Fix clickonce installer error "The element 'assembly' has invalid child element 'SignedInfo'". (#2112) Fixed Skyline install problem ("failed to check for an update") (reported by Joerg) Remove Windows Vista and Windows 7 GUIDs from app manifest file. Fix inspired by this StackOverflow post: https://stackoverflow.com/questions/27106385/clickonce-manifest-has-invalid-children-but-xml-matches-old-published-manifest see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1840136&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-05-29 07:17:33
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Build ProteoWizard::Core Linux x86_64 debug #2289 (e2531420095959dec6115f509fc408c15fe03b2c) successful Tests passed: 245. Agent: pwiz-linux-i-0c18168bd7591e1a0 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1840130&buildTypeId=bt72 Changes included (1 change) ==================================================== Change e2531420095959dec6115f509fc408c15fe03b2c by ni...@pr... (5 files): Fix clickonce installer error "The element 'assembly' has invalid child element 'SignedInfo'". (#2112) Fixed Skyline install problem ("failed to check for an update") (reported by Joerg) Remove Windows Vista and Windows 7 GUIDs from app manifest file. Fix inspired by this StackOverflow post: https://stackoverflow.com/questions/27106385/clickonce-manifest-has-invalid-children-but-xml-matches-old-published-manifest see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1840130&buildTypeId=bt72 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-05-27 08:15:25
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Build ProteoWizard::Core Linux x86_64 debug #2288 (f1af2016e99afaf95f7fe7562e15c4cef7beec52) failed Tests passed: 69; exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-024bae8049a55fa04 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1836950&buildTypeId=bt72 Changes included (1 change) ==================================================== Change f1af2016e99afaf95f7fe7562e15c4cef7beec52 by mat...@gm... (1 file): * added catch-all block in Reader_Waters to catch OS exceptions and allow client code like Skyline to see them without unexplained crashing see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1836950&buildTypeId=bt72 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-05-27 02:27:02
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Build Bumbershoot::Bumbershoot subset source tarball #597 (f1af2016e99afaf95f7fe7562e15c4cef7beec52) successful Success. Agent: pwiz-linux-i-0510d2325ee15a9d4 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1836908&buildTypeId=BumbershootSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-05-26 23:21:29
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Build Bumbershoot::Bumbershoot subset source tarball #596 (f1af2016e99afaf95f7fe7562e15c4cef7beec52) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-09bff94edce98f233 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1836251&buildTypeId=BumbershootSubsetSourceTarball Changes included (3 changes) ==================================================== Change f1af2016e99afaf95f7fe7562e15c4cef7beec52 by mat...@gm... (1 file): * added catch-all block in Reader_Waters to catch OS exceptions and allow client code like Skyline to see them without unexplained crashing Change c1a5fb4608565bd6581521fc359506c94510e63f by 523...@us... (1 file): Small fix for GraphSpectrum precursor combobox (#2107) Change 0d80c8657d8d4cfbbd4fe399b2de0dd411322f26 by ni...@pr... (4 files): Fix an error that could happen when merging .skyd created by different versions of Skyline with different sizes of the ChromPeak data structure. (#2106) When we use the "FastWrite" API to write out a list of ChromPeaks, the original FileStream would not know to be positioned at the new end of the file. If we then tried to use an ordinary FileStream to write some more data, then FileStream.VerifyOSHandlePosition would throw an error: The OS handle's position is not what FileStream expected. Do not use a handle simultaneously in one FileStream and in Win32 code or another FileStream. This may cause data loss. This would only happen if the joining of .skyd files involved where the first .skyd file being joined had been made by the current version of Skyline and the second .skyd file being joined had been created by an older version of Skyline which used a different size for the ChromPeak structure. (Also, remove unused overload of function "ReadArray" in ChromTransition5) Co-authored-by: Nicholas Shulman <ni...@uw...> see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1836251&buildTypeId=BumbershootSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-05-26 23:17:07
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Build ProteoWizard::BiblioSpec subset source tarball #1345 (f1af2016e99afaf95f7fe7562e15c4cef7beec52) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-00061800b9b7c7781 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1836177&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (1 change) ==================================================== Change f1af2016e99afaf95f7fe7562e15c4cef7beec52 by mat...@gm... (1 file): * added catch-all block in Reader_Waters to catch OS exceptions and allow client code like Skyline to see them without unexplained crashing see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1836177&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-05-25 08:27:39
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Build ProteoWizard::BiblioSpec subset source tarball #1344 (c1a5fb4608565bd6581521fc359506c94510e63f) successful Success. Agent: pwiz-linux-i-0b14ba5fcecf79be4 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1833424&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (1 change) ==================================================== Change c1a5fb4608565bd6581521fc359506c94510e63f by 523...@us... (1 file): Small fix for GraphSpectrum precursor combobox (#2107) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1833424&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-05-24 08:24:07
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Build ProteoWizard::BiblioSpec subset source tarball #1343 (0d80c8657d8d4cfbbd4fe399b2de0dd411322f26) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-06ff98a01f6890a00 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1831790&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (1 change) ==================================================== Change 0d80c8657d8d4cfbbd4fe399b2de0dd411322f26 by ni...@pr... (4 files): Fix an error that could happen when merging .skyd created by different versions of Skyline with different sizes of the ChromPeak data structure. (#2106) When we use the "FastWrite" API to write out a list of ChromPeaks, the original FileStream would not know to be positioned at the new end of the file. If we then tried to use an ordinary FileStream to write some more data, then FileStream.VerifyOSHandlePosition would throw an error: The OS handle's position is not what FileStream expected. Do not use a handle simultaneously in one FileStream and in Win32 code or another FileStream. This may cause data loss. This would only happen if the joining of .skyd files involved where the first .skyd file being joined had been made by the current version of Skyline and the second .skyd file being joined had been created by an older version of Skyline which used a different size for the ChromPeak structure. (Also, remove unused overload of function "ReadArray" in ChromTransition5) Co-authored-by: Nicholas Shulman <ni...@uw...> see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1831790&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-05-23 17:43:06
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Build ProteoWizard::ProteoWizard and Skyline Docker container (Wine x86_64) #7313 (c15b08c19dbd24c435bf24b7bb28ded8d214a478) failed to start Error while applying patch. Agent: pwiz-linux-i-0e870bba613ee4bec Build results: https://teamcity.labkey.org/viewLog.html?buildId=1830723&buildTypeId=ProteoWizardAndSkylineDockerContainerWineX8664 Changes included (1 change) ==================================================== Change c15b08c19dbd24c435bf24b7bb28ded8d214a478 by matt.chambers42 (2 files): Upgrade Wine to 7.8-devel and .NET to 4.8 (#17) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1830723&buildTypeId=ProteoWizardAndSkylineDockerContainerWineX8664 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-05-20 15:23:13
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Build ProteoWizard::Core Linux x86_64 debug #2285 (aa8be898e82295abb88b2c4d0cfc33ee162a8603) successful Tests passed: 245. Agent: pwiz-linux-i-0bab45b3d3f13db87 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1827416&buildTypeId=bt72 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-05-20 07:19:14
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Build ProteoWizard::Core Linux x86_64 debug #2284 (aa8be898e82295abb88b2c4d0cfc33ee162a8603) failed Tests failed: 1 (1 new), passed: 244. Agent: pwiz-linux-i-0145d480be3863bd3 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1827190&buildTypeId=bt72 Failed Tests Summary: Newly failed tests (1 test, alphabetically ordered) ================================================================== maxquant2 Newly failed tests details (naturally ordered) ================================================================== maxquant2 (new) ================= Blib command returned 256 Changes included (1 change) ==================================================== Change aa8be898e82295abb88b2c4d0cfc33ee162a8603 by 523...@us... (18 files): Updated library match to show spectra when multiple precursors are selected (#2076) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1827190&buildTypeId=bt72 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-05-18 15:54:59
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Build ProteoWizard::Skyline Code Inspection #9523 (c4a9c29fc6b08e2b041474d0b25a7d32183ac83b) successful Inspections total: 2, errors: 2. Agent: pwiz-vs-2022-i-0cc2e0ced1032a7fc Build results: https://teamcity.labkey.org/viewLog.html?buildId=1825154&buildTypeId=ProteoWizard_WindowsX8664msvcProfessionalSkylineResharperChecks Changes included (1 change) ==================================================== Change c4a9c29fc6b08e2b041474d0b25a7d32183ac83b by mat...@gm... (8 files): Protein association fixes (#2105) * refactored LastFastaFileName to a proper UserSetting * added IsBusy property to allow test code to wait properly * fixed test code not waiting for correct condition (FinalResults != null before _newDocument is finished) * fixed changing group proteins checkbox causing two UpdateParsimonyResults() calls * fixed MinPeptidesPerProtein not being persisted correctly to AssociateProteinsSettings see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1825154&buildTypeId=ProteoWizard_WindowsX8664msvcProfessionalSkylineResharperChecks ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-05-18 10:38:35
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Build ProteoWizard::Skyline master and PRs (Windows x86_64 debug, with code coverage) #3594 (61d743ab17d00993e36c265e415e15240567712b) successful Tests passed: 835. Agent: pwiz-vs-2022-i-042c9a1a4a1e79ef5 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1825018&buildTypeId=bt210 Changes included (3 changes) ==================================================== Change 61d743ab17d00993e36c265e415e15240567712b by ni...@pr... (2 files): Fix FormatException reading .bcfg file in international. (#2099) * Fix FormatException reading .bcfg file in international. Fixed "Input string was not in correct format" error reading .bcfg file on systems with different decimal separator (reported by Lutho). Change 855d2bb8bd344d807eb55ba820f40d51e870ffaa by ni...@pr... (4 files): Catch SQLite exception when creating cache (#2089) * Catch SQLite exception when creating cache Fixed "unhandled error" when spectral library cannot be read. (reported anonymously on exception web). Change 72f6e740948259b36aea1463d1a5fad847512791 by mat...@gm... (1 file): Fix use of default literal (#2103) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1825018&buildTypeId=bt210 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-05-18 08:23:31
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Build ProteoWizard::BiblioSpec subset source tarball #1339 (61d743ab17d00993e36c265e415e15240567712b) successful Success. Agent: pwiz-linux-i-022ab8f867c3eeed7 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1825056&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (3 changes) ==================================================== Change 61d743ab17d00993e36c265e415e15240567712b by ni...@pr... (2 files): Fix FormatException reading .bcfg file in international. (#2099) * Fix FormatException reading .bcfg file in international. Fixed "Input string was not in correct format" error reading .bcfg file on systems with different decimal separator (reported by Lutho). Change 855d2bb8bd344d807eb55ba820f40d51e870ffaa by ni...@pr... (4 files): Catch SQLite exception when creating cache (#2089) * Catch SQLite exception when creating cache Fixed "unhandled error" when spectral library cannot be read. (reported anonymously on exception web). Change 72f6e740948259b36aea1463d1a5fad847512791 by mat...@gm... (1 file): Fix use of default literal (#2103) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1825056&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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