[proteowizard-support] 2 questions

[Ryan T. F. <rya...@no...>]

Hello,

I had a couple of technical questions regarding ProteoWizard:


1.       I would like to reference the ProteoWizard CLI bindings DLL in a .NET application using mono in a Linux environment to parse mzML files.  Is this possible or have you heard of anyone trying to do this?  Any suggestions on how I might go about this?  I tried to do it directly with the CLI bindings and got an error that basically said mono doesn't play nice with C++/CLI.  We have a lot of .NET code to process and search the data and we'd like to get this running on a Rocks HPC.

2.       Does ProteoWizard attempt to handle spectrum noise in any way?  We would like to have noise information included in the resultant mzML (coming from Thermo .RAW), but there isn't any switch in msconvert.exe to do this.

Thank you very much for your time and all of your hard work on this wonderful tool.

Ryan Fellers
Senior Software Engineer
Proteomics Center of Excellence, Northwestern University
Email: rya...@no...<mailto:rya...@no...>