Re: [proteowizard-support] msconvert Through R for .raw files

[Matthew C. <mat...@gm...>]

Hi Gavin,

We ran into a similar issue with Apache. Some execution contexts don't let msconvert pop up the 
dialog. We'll soon transition to presenting the license agreements at download-time and will remove 
the runtime prompts at that time.

-Matt


On 3/18/2011 9:29 AM, Gavin Blackburn wrote:
> Hi,
>
> I’ve been setting up several peoples’ computers so they can process their data themselves and have a
> noticed a quirk of running msconvert through R. If you try to use msconvert through R after
> installation it will fail, however, if you first run it through the command line it will ask you to
> agree to using the MS Reader used to convert the .raw files. Once this has been done it will run
> through R. It’s not much of a problem but lead me to believe that it wouldn’t work on several
> machines until I discovered this.
>
> I was wondering why it doesn’t ask you to agree to using the MS Reader if you run it through R?
>
> Cheers,
>
> Gavin.
>
> *Gavin Blackburn*
>
> SULSA Technologist
>
> Strathclyde institute of Pharmacy and Biomedical Science
>
> 161 Cathedral Street,
>
> Glasgow.
>
> G4 0RE
>
> Tel: +44 (0)1415483427
>
> ScotMet: The Scottish Metabolomics Facility
>
> www.metabolomics.strath.ac.uk <http://www.metabolomics.strath.ac.uk>
>
>
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