Re: [proteowizard-support] Question about ProteoWizard

[Matt C. <mat...@va...>]

Try a newer snapshot build, which you can download from TeamCity:
http://teamcity.labkey.org:8080/repository/download/bt17/6477:id/pwiz-bin-linux-x86_64-gcc42-s-1_6_1601.tar.bz2

You'll have to login as guest before the URL will work.

-Matt


k2-...@hh... wrote:
> Hi Matt,
>
> Sorry, I forgot to inform you.
> That is pwiz-src-1_6_1328.tar.bz2, and my development environment is
> following.
>
> #uname -a
> Linux machine_name 2.6.18-8.1.4.el5custom #5 SMP Mon Jun 25 17:12:06 JST
> 2007 x86_64 x86_64 x86_64 GNU/Linux
>
> ~Ken
>
> ---
> [BP]BI  Kentaro Matsuura(ecl09701)
> Mailto: k2-...@hh...
> Voice: +81-298-47-5615  Fax: +81-298-47-7614
>
>
>
> -----作成者: Matthew Chambers <mat...@va...> -----
>
>
> 宛先: <k2-...@hh...>
> 送信者: Matthew Chambers <mat...@va...>
> 日付: 2009/12/10 00:44
> cc: <su...@pr...>, <s11...@hh...>,
> <k3-...@hh...>
> 件名: Re: [proteowizard-support] Question about ProteoWizard
>
> What version of pwiz?
>
> -Matt
>
>
> k2-...@hh... wrote:
>   
>> Dear all,
>>
>> When the ProteoWizard commandline tools read a mzML file, they say that
>> '[ChromatogramList_mzML::HandlerIndex] Unexpected element name:
>> indexListOffset', and stop.
>> (Sorry, I cannot send the file for some reasons.)
>>
>> Actually, the mzML file has only the 'spectrumList' element, and does not
>> have the 'chromatogramList' element.
>> Does that cause the above error?
>> Does the mzML file have to include the 'chromatogramList' element so as
>>     
> to
>   
>> be parsed with ProteoWizard correctly?
>> Would you tell me any other solution?
>>
>> Regards,
>> Kentar