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From: <jam...@us...> - 2009-02-11 15:32:21
|
Revision: 1488
http://obi.svn.sourceforge.net/obi/?rev=1488&view=rev
Author: jamesmalone
Date: 2009-02-11 15:32:18 +0000 (Wed, 11 Feb 2009)
Log Message:
-----------
added error corrected data set and output to error correction data transformation
Modified Paths:
--------------
trunk/src/ontology/branches/DataTransformation.owl
trunk/src/ontology/branches/DigitalEntityPlus.owl
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From: <jam...@us...> - 2009-02-11 15:06:08
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Revision: 1487
http://obi.svn.sourceforge.net/obi/?rev=1487&view=rev
Author: jamesmalone
Date: 2009-02-11 15:06:01 +0000 (Wed, 11 Feb 2009)
Log Message:
-----------
added error correction defined class. Nothing classifies under this yet but this is because i haven't added all objective and output data to everything yet, so not a concern.
Modified Paths:
--------------
trunk/src/ontology/branches/DataTransformation.owl
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From: <mco...@us...> - 2009-02-11 15:04:06
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Revision: 1486
http://obi.svn.sourceforge.net/obi/?rev=1486&view=rev
Author: mcourtot
Date: 2009-02-11 15:03:48 +0000 (Wed, 11 Feb 2009)
Log Message:
-----------
reverted to revision 1470
Revision Links:
--------------
http://obi.svn.sourceforge.net/obi/?rev=1470&view=rev
Modified Paths:
--------------
releases/2009-01-28/merged/OBI.owl
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From: <mco...@us...> - 2009-02-11 14:52:16
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Revision: 1485
http://obi.svn.sourceforge.net/obi/?rev=1485&view=rev
Author: mcourtot
Date: 2009-02-11 14:52:12 +0000 (Wed, 11 Feb 2009)
Log Message:
-----------
corrected anyURI
Modified Paths:
--------------
releases/2009-01-28/merged/OBI.owl
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From: <jam...@us...> - 2009-02-11 13:01:34
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Revision: 1482
http://obi.svn.sourceforge.net/obi/?rev=1482&view=rev
Author: jamesmalone
Date: 2009-02-11 11:31:28 +0000 (Wed, 11 Feb 2009)
Log Message:
-----------
Added classified data set and background corrected data set
Modified Paths:
--------------
trunk/src/ontology/branches/DigitalEntityPlus.owl
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From: <jam...@us...> - 2009-02-11 12:56:03
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Revision: 1484
http://obi.svn.sourceforge.net/obi/?rev=1484&view=rev
Author: jamesmalone
Date: 2009-02-11 12:01:04 +0000 (Wed, 11 Feb 2009)
Log Message:
-----------
correction to classified data set: is output of class prediction DTs (not centring)
Modified Paths:
--------------
trunk/src/ontology/branches/DigitalEntityPlus.owl
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From: <jam...@us...> - 2009-02-11 12:44:13
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Revision: 1483
http://obi.svn.sourceforge.net/obi/?rev=1483&view=rev
Author: jamesmalone
Date: 2009-02-11 11:38:04 +0000 (Wed, 11 Feb 2009)
Log Message:
-----------
added class predication dts (defined class)
added background correctoni dts (defined class)
added relevant output data sets to DTs that have either objective
Modified Paths:
--------------
trunk/src/ontology/branches/DataTransformation.owl
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From: <mco...@us...> - 2009-02-11 05:18:01
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Revision: 1481
http://obi.svn.sourceforge.net/obi/?rev=1481&view=rev
Author: mcourtot
Date: 2009-02-11 05:17:58 +0000 (Wed, 11 Feb 2009)
Log Message:
-----------
update device setting
Modified Paths:
--------------
trunk/src/ontology/branches/InstrumentAndPart.owl
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From: <mco...@us...> - 2009-02-11 05:17:29
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Revision: 1480
http://obi.svn.sourceforge.net/obi/?rev=1480&view=rev
Author: mcourtot
Date: 2009-02-11 05:17:26 +0000 (Wed, 11 Feb 2009)
Log Message:
-----------
update device setting
Modified Paths:
--------------
releases/2009-01-28/branches/InstrumentAndPart.owl
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From: <mco...@us...> - 2009-02-11 05:16:52
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Revision: 1479
http://obi.svn.sourceforge.net/obi/?rev=1479&view=rev
Author: mcourtot
Date: 2009-02-11 05:16:49 +0000 (Wed, 11 Feb 2009)
Log Message:
-----------
update device setting
Modified Paths:
--------------
releases/2009-01-28/merged/OBI.owl
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From: <mco...@us...> - 2009-02-11 04:27:10
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Revision: 1478
http://obi.svn.sourceforge.net/obi/?rev=1478&view=rev
Author: mcourtot
Date: 2009-02-11 04:27:06 +0000 (Wed, 11 Feb 2009)
Log Message:
-----------
expanded definition source for MSI terms (so that Chris can test dbxrefs for obo format)
removed duplicated annotation properties
consistency checked
inferred view checked
Modified Paths:
--------------
releases/2009-01-28/merged/OBI.owl
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From: <jen...@us...> - 2009-02-10 19:25:05
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Revision: 1477
http://obi.svn.sourceforge.net/obi/?rev=1477&view=rev
Author: jenfostel
Date: 2009-02-10 19:24:59 +0000 (Tue, 10 Feb 2009)
Log Message:
-----------
edited role branch core terms to match workshop discussion; added dated editor notes.
Modified Paths:
--------------
trunk/src/ontology/branches/Role.owl
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From: <jam...@us...> - 2009-02-10 17:09:21
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Revision: 1476
http://obi.svn.sourceforge.net/obi/?rev=1476&view=rev
Author: jamesmalone
Date: 2009-02-10 17:09:17 +0000 (Tue, 10 Feb 2009)
Log Message:
-----------
added output data to all center calculations and class discovery DTs
awesome-o
Modified Paths:
--------------
trunk/src/ontology/branches/DataTransformation.owl
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From: <jam...@us...> - 2009-02-10 16:55:37
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Revision: 1475
http://obi.svn.sourceforge.net/obi/?rev=1475&view=rev
Author: jamesmalone
Date: 2009-02-10 16:55:35 +0000 (Tue, 10 Feb 2009)
Log Message:
-----------
Added center value (data item) and clustered data set (data set)
Modified Paths:
--------------
trunk/src/ontology/branches/DigitalEntityPlus.owl
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From: <jam...@us...> - 2009-02-10 16:02:56
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Revision: 1474
http://obi.svn.sourceforge.net/obi/?rev=1474&view=rev
Author: jamesmalone
Date: 2009-02-10 16:02:54 +0000 (Tue, 10 Feb 2009)
Log Message:
-----------
Added average value as output to those DTs that have objective averaging
Modified Paths:
--------------
trunk/src/ontology/branches/DataTransformation.owl
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From: <jam...@us...> - 2009-02-10 15:34:28
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Revision: 1473
http://obi.svn.sourceforge.net/obi/?rev=1473&view=rev
Author: jamesmalone
Date: 2009-02-10 15:34:25 +0000 (Tue, 10 Feb 2009)
Log Message:
-----------
moved normalised data set from Quality to DENRIE
added average value
Modified Paths:
--------------
trunk/src/ontology/branches/DigitalEntityPlus.owl
trunk/src/ontology/branches/Quality.owl
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From: <jam...@us...> - 2009-02-10 14:01:25
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Revision: 1472
http://obi.svn.sourceforge.net/obi/?rev=1472&view=rev
Author: jamesmalone
Date: 2009-02-10 14:01:21 +0000 (Tue, 10 Feb 2009)
Log Message:
-----------
Removed lots of crap placed onto 'data transformation' class, no idea where this has come from:
has_input some OWL:Nothing
has_output some OWL:Nothing
obsoleted_utilizes_reagent??
Where do these come from? Is there an OBI fairy?
Modified Paths:
--------------
trunk/src/ontology/branches/DataTransformation.owl
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From: <jam...@us...> - 2009-02-10 13:26:41
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Revision: 1471
http://obi.svn.sourceforge.net/obi/?rev=1471&view=rev
Author: jamesmalone
Date: 2009-02-10 13:26:37 +0000 (Tue, 10 Feb 2009)
Log Message:
-----------
Added extra nec and suf regarding outputs to normalized DTs
(achieves_planned_objective some 'normalization objective') or (has_specified_output_information some 'normalized data set')
Modified Paths:
--------------
trunk/src/ontology/branches/DataTransformation.owl
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From: <al...@us...> - 2009-02-10 09:21:28
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Revision: 1470
http://obi.svn.sourceforge.net/obi/?rev=1470&view=rev
Author: alanr
Date: 2009-02-10 09:21:24 +0000 (Tue, 10 Feb 2009)
Log Message:
-----------
repair annotation property serialized as anyURI (p4)
Modified Paths:
--------------
releases/2009-01-28/merged/OBI.owl
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From: <al...@us...> - 2009-02-10 09:12:53
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Revision: 1469
http://obi.svn.sourceforge.net/obi/?rev=1469&view=rev
Author: alanr
Date: 2009-02-10 09:12:49 +0000 (Tue, 10 Feb 2009)
Log Message:
-----------
replace anyURI serialization of annotation properties (p4)
Modified Paths:
--------------
releases/2009-01-28/branches/PlanAndPlannedProcess.owl
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From: <al...@us...> - 2009-02-10 09:11:58
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Revision: 1468
http://obi.svn.sourceforge.net/obi/?rev=1468&view=rev
Author: alanr
Date: 2009-02-10 09:11:50 +0000 (Tue, 10 Feb 2009)
Log Message:
-----------
replace anyURI serialization of annotation property by p4
Modified Paths:
--------------
releases/2009-01-28/branches/Relations.owl
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From: <al...@us...> - 2009-02-10 09:07:41
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Revision: 1467
http://obi.svn.sourceforge.net/obi/?rev=1467&view=rev
Author: alanr
Date: 2009-02-10 09:07:40 +0000 (Tue, 10 Feb 2009)
Log Message:
-----------
repair anyURI serialization of annotation properties by p4
Modified Paths:
--------------
trunk/src/ontology/branches/Relations.owl
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From: <al...@us...> - 2009-02-10 09:07:02
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Revision: 1466
http://obi.svn.sourceforge.net/obi/?rev=1466&view=rev
Author: alanr
Date: 2009-02-10 09:06:59 +0000 (Tue, 10 Feb 2009)
Log Message:
-----------
repair anyURI serialization of annotation property by p4
Modified Paths:
--------------
trunk/src/ontology/branches/PlanAndPlannedProcess.owl
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From: <al...@us...> - 2009-02-10 08:44:14
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Revision: 1465
http://obi.svn.sourceforge.net/obi/?rev=1465&view=rev
Author: alanr
Date: 2009-02-10 08:44:11 +0000 (Tue, 10 Feb 2009)
Log Message:
-----------
port from release
data transformation has no specified input or output and doesn't utilize reagent
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obofoundry.org/obo/OBI_0000293"/> <!-- has_specified_output -->
<owl:allValuesFrom rdf:resource="http://www.w3.org/2002/07/owl#Nothing"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obofoundry.org/obo/OBI_0000299"/> <!-- has_specified_input -->
<owl:allValuesFrom rdf:resource="http://www.w3.org/2002/07/owl#Nothing"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obofoundry.org/obo/OBI_0000309"/> <!-- utilizes reagent -->
<owl:allValuesFrom rdf:resource="http://www.w3.org/2002/07/owl#Nothing"/>
</owl:Restriction>
</rdfs:subClassOf>
Modified Paths:
--------------
trunk/src/ontology/branches/DataTransformation.owl
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From: <mco...@us...> - 2009-02-09 20:11:47
|
Revision: 1464
http://obi.svn.sourceforge.net/obi/?rev=1464&view=rev
Author: mcourtot
Date: 2009-02-09 20:11:39 +0000 (Mon, 09 Feb 2009)
Log Message:
-----------
remove obsolete reference has_specified_output some genotype from genotyping.
Added
realizes some (is_concretization_of some ('plan specification'
and has_part some 'sequence feature identification objective'))
Modified Paths:
--------------
trunk/src/ontology/branches/PlanAndPlannedProcess.owl
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