Re: [micro-manager-general] Micro-manager and arduino

[Luciano M. <luc...@gm...>]

Dear Cindy, I suggest you to check the openspin microscopy project I works
with MManager and arduino and I think it does what you need.
https://sites.google.com/site/openspinmicroscopy/
Best,
Luciano

El vie., 20 mar. 2020 0:55, Cindy Munoz <cmm...@gm...> escribió:

> Hello everyone,  I have a unique imaging application that I'm trying to
> develop with the help of Micro manager so that I have less image data and
> steps to go through.
>
>  I have a stepper motor that is used to rotate a vial and to image I have
> a ccd camera. I will be using fluorescence staining to image some particles
> inside the vial and want to image the entire surface of the vial to image
> all particles in the vial. I use the step motor to rotate the vial. I tried
> to do this using imageJ but I will have a lot of image data to analyze and
> I'm trying to cut down on steps if possible.
>
> What I'm trying to do is to take an image at a specified motor position
> and continue to do this until the vial has rotated one full revolution.
> Then stitch all images together to get the entire surface of the vial with
> minimized distortion.
>
>  I have a Point Grey Chameleon camera that I was able to configure in
> micro manager. I was also able to connect an arduino using the micro
> manager wiki and currently have this as a shutter. I have a separate
> arduino to control the step motor. I'd like to sync both the motor and
> micro manager so that at a specified position Micro manager takes a
> picture, sends a signal to the motor, the motor moves again, then Micro
> manager takes another picture. This  process would continue until one
> entire revolution is completed. I'd like to know if something like this
> could be done easily with Micro manager. I do not have coding or
> electronics experience and all that I have done has been based on reading
> tutorials online. If you can provide some insight into how I would be able
> to do this or direct me to other tutorials I would highly appreciate it.
>
> Thank you,
> Quiroz-1
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