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From: Jeremy S. <j.a...@da...> - 2012-02-08 16:22:21
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Hi All, I tried to update to the new version but I get the following error message: ifort -g -O3 -xHost -fma -align -falign-functions -ansi-alias -traceback -vec-report0 -traceback -error-limit 6 -openmp -I../public -I../private -I../../include -warn all -warn nounused -implicitnone -check uninit -check pointers -check bounds -check all -O3 -fp-model precise -prec-div -prec-sqrt -g -c -free -I/include ../public/se_support.f ../public/se_support.f(289): error #5102: Cannot open include file 'FSE_f90.fi' include 'FSE_f90.fi' --------------^ ../public/se_support.f(307): error #6404: This name does not have a type, and must have an explicit type. [SE_DOUBLE] xmm, "mass", SE_DOUBLE, & --------------------------^ ../public/se_support.f(313): error #6404: This name does not have a type, and must have an explicit type. [SE_INT] konvekt, "convection_indicator", SE_INT, & ----------------------------------------------^ ../public/se_support.f(314): error #6404: This name does not have a type, and must have an explicit type. [SE_DOUBLE_2D] ypsevol, "iso_massf", SE_DOUBLE_2D, MSL, NYPS, & -----------------------------------^ compilation aborted for ../public/se_support.f (code 1) make: *** [se_support.o] Error 1 /nfs/scratch/jas246/isochrones/mesa/star/make FAILED /nfs/scratch/jas246/isochrones/mesa/star ./build_and_test FAILED Apparently it is because the file 'FSE_f90.fi' does not exist. Has anyone had any similar problems and does anyone have the file I need? Cheers, Jeremy |
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From: Jean-Claude P. <jc...@gm...> - 2012-02-08 14:14:54
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Awesome. Thanks Grant and Frank, JC On 08/02/12 03:24, Grant Newsham wrote: > Hi Jean-Claude, > > In the current test suite there is a create_planets directory that > does exactly that. > > Regards, > > Grant Newsham, Arizona State University. > > On Tue, Feb 7, 2012 at 10:19 PM, Jean-Claude Passy <jc...@gm... > <mailto:jc...@gm...>> wrote: > > Hi all, > > I see in the test_suite that MESA can evolve a brown dwarf. How low in > mass can MESA go? Can it do planets? > > Thanks, > > JC > > ------------------------------------------------------------------------------ > Keep Your Developer Skills Current with LearnDevNow! > The most comprehensive online learning library for Microsoft > developers > is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, > MVC3, > Metro Style Apps, more. Free future releases when you subscribe now! > http://p.sf.net/sfu/learndevnow-d2d > _______________________________________________ > mesa-users mailing list > mes...@li... > <mailto:mes...@li...> > https://lists.sourceforge.net/lists/listinfo/mesa-users > > |
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From: Francis T. <fx...@ma...> - 2012-02-08 05:33:51
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section 7.1 of paxton et al 2011 will answer some of your questions. fxt On Feb 7, 2012, at 10:19 PM, Jean-Claude Passy wrote: > Hi all, > > I see in the test_suite that MESA can evolve a brown dwarf. How low in > mass can MESA go? Can it do planets? > > Thanks, > > JC > > ------------------------------------------------------------------------------ > Keep Your Developer Skills Current with LearnDevNow! > The most comprehensive online learning library for Microsoft developers > is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, > Metro Style Apps, more. Free future releases when you subscribe now! > http://p.sf.net/sfu/learndevnow-d2d > _______________________________________________ > mesa-users mailing list > mes...@li... > https://lists.sourceforge.net/lists/listinfo/mesa-users |
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From: Jean-Claude P. <jc...@gm...> - 2012-02-08 05:12:22
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Hi all, I see in the test_suite that MESA can evolve a brown dwarf. How low in mass can MESA go? Can it do planets? Thanks, JC |
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From: <umb...@un...> - 2012-02-08 02:00:29
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Hi all,
For the first time, I'm trying to add my own code to MESA, in
particular I want to implement an alternative to convective
overshooting. I saw that the easyest way to do that is to edit the
run_star_extras.f file, but I didn't have success.. Here following the
beginning of my run_star_extras.f file:
module run_star_extras
use star_lib
use star_def
use const_def
implicit none
! these routines are called by the standard run_star check_model
contains
subroutine extras_controls(s, ierr, id)
type (star_info), pointer :: s
integer, intent(out) :: ierr
ierr = 0
! this is the place to set any procedure pointers you want to change
! e.g., other_wind, other_mixing, other_energy (see star_data.dek)
subroutine other_mixing(id, ierr)
integer, intent(in) :: id
integer, intent(out) :: ierr
ierr = 0
end subroutine other_mixing
procedure(franec_diffusion), pointer :: other_mixing
s% other_mixing => franec_diffusion
end subroutine extras_controls
"franec_diffusion" is the name of the subroutine I added in this
file... Anyway I received some errors after compyling.. here there are
some of them after doing ./mk:
gfortran -fno-range-check -fopenmp -fbounds-check -g
-I/home/umberto/mesa/include -I/home/umberto/mesasdk/include -c
-ffree-form ../src/run_star_extras.f
../src/run_star_extras.f:42.9:
subroutine other_mixing(id, ierr)
1
Error: Unclassifiable statement at (1)
../src/run_star_extras.f:43.34:
integer, intent(in) :: id
1
Error: Unexpected data declaration statement at (1)
../src/run_star_extras.f:44.37:
integer, intent(out) :: ierr
1
Error: Symbol 'ierr' at (1) already has basic type of INTEGER
../src/run_star_extras.f:46.36:
end subroutine other_mixing
1
Error: Expected label 'extras_controls' for END SUBROUTINE statement at (1)
../src/run_star_extras.f:48.58:
procedure(franec_diffusion), pointer :: other_mixing
1
Error: Unexpected PROCEDURE statement at (1)
../src/run_star_extras.f:34.44:
subroutine extras_controls(s, ierr, id)
1
Error: Symbol 'id' at (1) has no IMPLICIT type
../src/run_star_extras.f:49.41:
s% other_mixing => franec_diffusion
1
Error: Symbol 'franec_diffusion' at (1) has no IMPLICIT type
../src/run_star_extras.f:257.25:
Does anyone know where the problem is? Thanks a lot!!!
Umberto Battino
----------------------------------------------------------------
This message was sent using IMP, the Internet Messaging Program.
|
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From: Ehsan M. <mor...@ia...> - 2012-02-06 06:30:39
|
Hi > how to set the mesh grid, i want to increase the mesh grid numbers. thx In /mesa/star/public/star_defaults.dek and in the part called "mesh adjustment", you will find several options to modify the mesh gridding for your specific run. I hope it helps. Ehsan. > > > songling > > > > > At 2012-02-04 15:36:24,mes...@li... wrote: >>Send mesa-users mailing list submissions to >> mes...@li... >> >>To subscribe or unsubscribe via the World Wide Web, visit >> https://lists.sourceforge.net/lists/listinfo/mesa-users >>or, via email, send a message with subject or body 'help' to >> mes...@li... >> >>You can reach the person managing the list at >> mes...@li... >> >>When replying, please edit your Subject line so it is more specific >>than "Re: Contents of mesa-users digest..." >> >> >>Today's Topics: >> >> 1. Re: error installing rev 3851 (const package) (Jean-Claude Passy) >> 2. Re: error installing rev 3851 (const package) (Richard Townsend) >> 3. Re: error installing rev 3851 (const package) (Jean-Claude Passy) >> 4. problem with running ./rn... (Burak Ulas) >> 5. Re: problem with running ./rn... (Richard Townsend) >> 6. problem compiling version 3851 on red hat (Phil Arras) >> 7. Re: problem compiling version 3851 on red hat (Francis Timmes) >> >> >>---------------------------------------------------------------------- >> >>Message: 1 >>Date: Wed, 01 Feb 2012 11:58:37 -0600 >>From: Jean-Claude Passy <jc...@gm...> >>Subject: Re: [mesa-users] error installing rev 3851 (const package) >>To: Richard Townsend <tow...@as...> >>Cc: "mes...@li..." >> <mes...@li...> >>Message-ID: <4F2...@uv...> >>Content-Type: text/plain; charset=ISO-8859-1; format=flowed >> >>Oh, sorry... ifort cannot be used with SDK? >> >>Thanks, >> >>JC >> >>On 01/02/12 10:46, Richard Townsend wrote: >>> For some reason, the Intel Fortran compiler (ifort) is being used >>> instead of gfortran (the SDK compiler). Can you check that >>> utils/makefile_header defines FC as gfortran? >>> >>> cheers, >>> >>> Rich >>> >>> On Feb 1, 2012, at 10:48 AM, Jean-Claude Passy wrote: >>> >>>> Hi all, >>>> >>>> I get an error when trying to install rev 3851 using mesasdk on my Mac >>>> 10.6.8: >>>> >>>> -------------------------------------------------------------------------- >>>> [10:40:03] Obiwan:$ ./install >>>> checking if ndiff is installed ... >>>> yes! >>>> >>>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>>> building const package. >>>> >>>> ifort -fno-range-check -fopenmp -I../public -I../private >>>> -I../../include -Wunused-value -Werror -W -fimplicit-none -O2 -c >>>> -ffixed-form -ffixed-line-length-132 ../public/const_def.f >>>> ifort: command line warning #10006: ignoring unknown option >>>> '-fno-range-check' >>>> ifort: command line warning #10157: ignoring option '-W'; argument is >>>> of wrong type >>>> ifort: command line remark #10148: option '-Werror' not supported >>>> ifort: command line error: option '-W' is ambiguous >>>> make: *** [const_def.o] Error 1 >>>> >>>> /Users/jean-claudepassy/Work/MESA/mesa2/const/make >>>> FAILED >>>> >>>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>>> ./build_and_test FAILED >>>> -------------------------------------------------------------------------- >>>> >>>> This error looks (way too) familiar but I have not be able to find >>>> anything on the list... >>>> Thanks a lot for your help, >>>> >>>> JC >>>> ------------------------------------------------------------------------------ >>>> Keep Your Developer Skills Current with LearnDevNow! >>>> The most comprehensive online learning library for Microsoft >>>> developers >>>> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, >>>> MVC3, >>>> Metro Style Apps, more. Free future releases when you subscribe now! >>>> http://p.sf.net/sfu/learndevnow-d2d_______________________________________________ >>>> mesa-users mailing list >>>> mes...@li... >>>> https://lists.sourceforge.net/lists/listinfo/mesa-users >> >> >> >>------------------------------ >> >>Message: 2 >>Date: Wed, 1 Feb 2012 12:57:20 -0600 >>From: Richard Townsend <tow...@as...> >>Subject: Re: [mesa-users] error installing rev 3851 (const package) >>To: jc...@uv... >>Cc: "mes...@li..." >> <mes...@li...> >>Message-ID: <2E7...@as...> >>Content-Type: text/plain; charset=iso-8859-1 >> >>Unfortunately not; the idea of the SDK is to provide a complete kit >> (compiler, tools & libraries) for building MESA. >> >>It's worth noting that the gfortran compiler produces code that is not >> much slower than ifort. More importantly, it is less buggy and has more >> support for Fortran 2003/2008 features. >> >>cheers, >> >>Rich >> >>On Feb 1, 2012, at 11:58 AM, Jean-Claude Passy wrote: >> >>> Oh, sorry... ifort cannot be used with SDK? >>> >>> Thanks, >>> >>> JC >>> >>> On 01/02/12 10:46, Richard Townsend wrote: >>>> For some reason, the Intel Fortran compiler (ifort) is being used >>>> instead of gfortran (the SDK compiler). Can you check that >>>> utils/makefile_header defines FC as gfortran? >>>> >>>> cheers, >>>> >>>> Rich >>>> >>>> On Feb 1, 2012, at 10:48 AM, Jean-Claude Passy wrote: >>>> >>>>> Hi all, >>>>> >>>>> I get an error when trying to install rev 3851 using mesasdk on my >>>>> Mac 10.6.8: >>>>> >>>>> -------------------------------------------------------------------------- >>>>> [10:40:03] Obiwan:$ ./install >>>>> checking if ndiff is installed ... >>>>> yes! >>>>> >>>>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>>>> building const package. >>>>> >>>>> ifort -fno-range-check -fopenmp -I../public -I../private >>>>> -I../../include -Wunused-value -Werror -W -fimplicit-none -O2 -c >>>>> -ffixed-form -ffixed-line-length-132 ../public/const_def.f >>>>> ifort: command line warning #10006: ignoring unknown option >>>>> '-fno-range-check' >>>>> ifort: command line warning #10157: ignoring option '-W'; argument is >>>>> of wrong type >>>>> ifort: command line remark #10148: option '-Werror' not supported >>>>> ifort: command line error: option '-W' is ambiguous >>>>> make: *** [const_def.o] Error 1 >>>>> >>>>> /Users/jean-claudepassy/Work/MESA/mesa2/const/make >>>>> FAILED >>>>> >>>>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>>>> ./build_and_test FAILED >>>>> -------------------------------------------------------------------------- >>>>> >>>>> This error looks (way too) familiar but I have not be able to find >>>>> anything on the list... >>>>> Thanks a lot for your help, >>>>> >>>>> JC >>>>> ------------------------------------------------------------------------------ >>>>> Keep Your Developer Skills Current with LearnDevNow! >>>>> The most comprehensive online learning library for Microsoft >>>>> developers >>>>> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, >>>>> MVC3, >>>>> Metro Style Apps, more. Free future releases when you subscribe now! >>>>> http://p.sf.net/sfu/learndevnow-d2d_______________________________________________ >>>>> mesa-users mailing list >>>>> mes...@li... >>>>> https://lists.sourceforge.net/lists/listinfo/mesa-users >> >> >> >> >>------------------------------ >> >>Message: 3 >>Date: Wed, 01 Feb 2012 14:04:45 -0600 >>From: Jean-Claude Passy <jc...@gm...> >>Subject: Re: [mesa-users] error installing rev 3851 (const package) >>To: Richard Townsend <tow...@as...> >>Cc: "mes...@li..." >> <mes...@li...> >>Message-ID: <4F2...@uv...> >>Content-Type: text/plain; charset=ISO-8859-1; format=flowed >> >>Thanks Nate and Richard for your explanations. >>Cheers, >> >>JC >> >>On 01/02/12 12:57, Richard Townsend wrote: >>> Unfortunately not; the idea of the SDK is to provide a complete kit >>> (compiler, tools& libraries) for building MESA. >>> >>> It's worth noting that the gfortran compiler produces code that is not >>> much slower than ifort. More importantly, it is less buggy and has more >>> support for Fortran 2003/2008 features. >>> >>> cheers, >>> >>> Rich >>> >>> On Feb 1, 2012, at 11:58 AM, Jean-Claude Passy wrote: >>> >>>> Oh, sorry... ifort cannot be used with SDK? >>>> >>>> Thanks, >>>> >>>> JC >>>> >>>> On 01/02/12 10:46, Richard Townsend wrote: >>>>> For some reason, the Intel Fortran compiler (ifort) is being used >>>>> instead of gfortran (the SDK compiler). Can you check that >>>>> utils/makefile_header defines FC as gfortran? >>>>> >>>>> cheers, >>>>> >>>>> Rich >>>>> >>>>> On Feb 1, 2012, at 10:48 AM, Jean-Claude Passy wrote: >>>>> >>>>>> Hi all, >>>>>> >>>>>> I get an error when trying to install rev 3851 using mesasdk on my >>>>>> Mac 10.6.8: >>>>>> >>>>>> -------------------------------------------------------------------------- >>>>>> [10:40:03] Obiwan:$ ./install >>>>>> checking if ndiff is installed ... >>>>>> yes! >>>>>> >>>>>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>>>>> building const package. >>>>>> >>>>>> ifort -fno-range-check -fopenmp -I../public -I../private >>>>>> -I../../include -Wunused-value -Werror -W -fimplicit-none -O2 -c >>>>>> -ffixed-form -ffixed-line-length-132 ../public/const_def.f >>>>>> ifort: command line warning #10006: ignoring unknown option >>>>>> '-fno-range-check' >>>>>> ifort: command line warning #10157: ignoring option '-W'; argument >>>>>> is of wrong type >>>>>> ifort: command line remark #10148: option '-Werror' not supported >>>>>> ifort: command line error: option '-W' is ambiguous >>>>>> make: *** [const_def.o] Error 1 >>>>>> >>>>>> /Users/jean-claudepassy/Work/MESA/mesa2/const/make >>>>>> FAILED >>>>>> >>>>>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>>>>> ./build_and_test FAILED >>>>>> -------------------------------------------------------------------------- >>>>>> >>>>>> This error looks (way too) familiar but I have not be able to find >>>>>> anything on the list... >>>>>> Thanks a lot for your help, >>>>>> >>>>>> JC >>>>>> ------------------------------------------------------------------------------ >>>>>> Keep Your Developer Skills Current with LearnDevNow! >>>>>> The most comprehensive online learning library for Microsoft >>>>>> developers >>>>>> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, >>>>>> MVC3, >>>>>> Metro Style Apps, more. Free future releases when you subscribe now! >>>>>> http://p.sf.net/sfu/learndevnow-d2d_______________________________________________ >>>>>> mesa-users mailing list >>>>>> mes...@li... >>>>>> https://lists.sourceforge.net/lists/listinfo/mesa-users >> >> >> >>------------------------------ >> >>Message: 4 >>Date: Thu, 2 Feb 2012 05:46:51 -0800 (PST) >>From: Burak Ulas <bu...@ym...> >>Subject: [mesa-users] problem with running ./rn... >>To: mesa <mes...@li...> >>Message-ID: >> <132...@we...> >>Content-Type: text/plain; charset="us-ascii" >> >>Dear all, >> >>I met with following problem when I type the command ./rn : >> >>./rn: line 5: ./star: No such file or directory >> >>I think the program searches another executable called "star" to run. I >> could not manage to find it in anywhere of mesa directory. >> >> >>Could it be a installation problem from beginning? >> >> >>Any suggestion would be appritiated. >> >> >>Best regards, >> >>Burak. >>-------------- next part -------------- >>An HTML attachment was scrubbed... >> >>------------------------------ >> >>Message: 5 >>Date: Thu, 2 Feb 2012 07:53:43 -0600 >>From: Richard Townsend <tow...@as...> >>Subject: Re: [mesa-users] problem with running ./rn... >>To: Burak Ulas <bu...@ym...> >>Cc: mesa <mes...@li...> >>Message-ID: <53F...@as...> >>Content-Type: text/plain; charset=us-ascii >> >>Have you tried doing './mk' first, to build the executable? >> >>cheers, >> >>Rich >> >>On Feb 2, 2012, at 7:46 AM, Burak Ulas wrote: >> >>> Dear all, >>> >>> I met with following problem when I type the command ./rn : >>> >>> ./rn: line 5: ./star: No such file or directory >>> >>> I think the program searches another executable called "star" to run. I >>> could not manage to find it in anywhere of mesa directory. >>> >>> Could it be a installation problem from beginning? >>> >>> Any suggestion would be appritiated. >>> >>> Best regards, >>> >>> Burak. >>> ------------------------------------------------------------------------------ >>> Keep Your Developer Skills Current with LearnDevNow! >>> The most comprehensive online learning library for Microsoft developers >>> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, >>> MVC3, >>> Metro Style Apps, more. Free future releases when you subscribe now! >>> http://p.sf.net/sfu/learndevnow-d2d_______________________________________________ >>> mesa-users mailing list >>> mes...@li... >>> https://lists.sourceforge.net/lists/listinfo/mesa-users >> >> >> >> >>------------------------------ >> >>Message: 6 >>Date: Fri, 3 Feb 2012 14:51:03 -0500 (EST) >>From: Phil Arras <pl...@ma...> >>Subject: [mesa-users] problem compiling version 3851 on red hat >>To: mes...@li... >>Cc: Phil Arras <ar...@vi...> >>Message-ID: >> <alp...@Ye...> >>Content-Type: TEXT/PLAIN; format=flowed; charset=US-ASCII >> >> >>Hello, >> >>I'm trying to install mesa with red hat CentOS 5.7 and intel fortran 12, >>and without using sdk (as no root access on this machine). >> >>mesa successfully installed with USE_PGSTAR = NO in makefile_header. >> >>mesa's version of pgplot was then compiled with ifort, and seemed to work >>in that the demos ran. the environment variable PGPLOT_DIR was set to the >>correct directory. >> >>I then did ./clean and tried the recommended flags to install mesa with >>pgstar on red hat: >> >>USE_PGSTAR = YES >>LOAD_PGPLOT = -L${PGPLOT_DIR} -lpgplot -L/usr/lib64 -lX11 -lsvml -lpng >>FCstatic = -shared-intel #-Bstatic -static-intel >> >>Compilation went a long way, but then failed on mesa star with the >>following error message: >> >>--------------------------------------------------------------------------- >> >>ifort -vec-report0 -traceback -error-limit 6 -openmp -threads -o >> ../star >>\ >> run_star_extras.o run_star.o run.o -L../../make -lstar >>-L../../../lib -ldiffusion -lionization -latm -lcolors -lmlt -leos -lkap >>-lnet -lscreen -lrates -lreaclib >>-lweak -lneu -lchem -linterp_2d -linterp_1d -lnum -lutils -lalert -lconst >>-lmtx -lmesaklu -lmesalapack -lmesablas -L/local/stars/mesa/utils/pgplot >>-lpgplot -L/usr/lib64 >>-lX11 -lsvml -lpng >>ld: ../star: hidden symbol `__intel_cpu_indicator_init' in >>/astro64/intel/compiler12/composerxe-2011.2.137/compiler/lib/intel64/libirc.a(cpu_disp.o) >>is referenced by DSO >>ld: final link failed: Nonrepresentable section on output >>make: *** [star] Error 1 >>FAILED >>/local/stars/mesa/star/test >>FAILED >>/local/stars/mesa/star >>./build_and_test FAILED >> >>------------------------------------------------------------------------------ >> >> >>Does anyone have ideas on how to fix this? Thanks!!! >> >>Cheers, >> >>Phil >> >> >> >>------------------------------ >> >>Message: 7 >>Date: Sat, 04 Feb 2012 00:36:10 -0700 >>From: Francis Timmes <fx...@ma...> >>Subject: Re: [mesa-users] problem compiling version 3851 on red hat >>To: Phil Arras <pl...@ma...> >>Cc: mes...@li..., Phil Arras <ar...@vi...> >>Message-ID: <E0F...@ma...> >>Content-Type: text/plain; CHARSET=US-ASCII >> >>hi phil, >> >>i don't know and do not have access to ubuntu, >>but here are some suggestions: >> >>did you source the intel environment scripts? >> >>> composerxe-2011.2.137 >> >>this is a bit dated. can you use the latest version, 12.1.2 20111207 ? >> >>you may have linked a version of OpenMP library which is >>older than your compiler or your MKL. make sure everything points >>to the same version of the compiler. >> >>you could also try using the -Bstatic flag in the definition >>of FCstatic instead of -shared-intel >> >>you may also find this link helpful >>http://software.intel.com/en-us/articles/using-intel-compilers-for-linux-with-ubuntu/ >> >>what c compiler & version did you use when compiling pgplot? >> >>fxt >> >> >> >>On Feb 3, 2012, at 12:51 PM, Phil Arras wrote: >> >>> >>> Hello, >>> >>> I'm trying to install mesa with red hat CentOS 5.7 and intel fortran >>> 12, >>> and without using sdk (as no root access on this machine). >>> >>> mesa successfully installed with USE_PGSTAR = NO in makefile_header. >>> >>> mesa's version of pgplot was then compiled with ifort, and seemed to >>> work >>> in that the demos ran. the environment variable PGPLOT_DIR was set to >>> the >>> correct directory. >>> >>> I then did ./clean and tried the recommended flags to install mesa with >>> pgstar on red hat: >>> >>> USE_PGSTAR = YES >>> LOAD_PGPLOT = -L${PGPLOT_DIR} -lpgplot -L/usr/lib64 -lX11 -lsvml -lpng >>> FCstatic = -shared-intel #-Bstatic -static-intel >>> >>> Compilation went a long way, but then failed on mesa star with the >>> following error message: >>> >>> --------------------------------------------------------------------------- >>> >>> ifort -vec-report0 -traceback -error-limit 6 -openmp -threads -o >>> ../star >>> \ >>> run_star_extras.o run_star.o run.o -L../../make -lstar >>> -L../../../lib -ldiffusion -lionization -latm -lcolors -lmlt -leos >>> -lkap >>> -lnet -lscreen -lrates -lreaclib >>> -lweak -lneu -lchem -linterp_2d -linterp_1d -lnum -lutils -lalert >>> -lconst >>> -lmtx -lmesaklu -lmesalapack -lmesablas >>> -L/local/stars/mesa/utils/pgplot >>> -lpgplot -L/usr/lib64 >>> -lX11 -lsvml -lpng >>> ld: ../star: hidden symbol `__intel_cpu_indicator_init' in >>> /astro64/intel/compiler12/composerxe-2011.2.137/compiler/lib/intel64/libirc.a(cpu_disp.o) >>> is referenced by DSO >>> ld: final link failed: Nonrepresentable section on output >>> make: *** [star] Error 1 >>> FAILED >>> /local/stars/mesa/star/test >>> FAILED >>> /local/stars/mesa/star >>> ./build_and_test FAILED >>> >>> ------------------------------------------------------------------------------ >>> >>> >>> Does anyone have ideas on how to fix this? Thanks!!! >>> >>> Cheers, >>> >>> Phil >>> >>> ------------------------------------------------------------------------------ >>> Try before you buy = See our experts in action! >>> The most comprehensive online learning library for Microsoft developers >>> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, >>> MVC3, >>> Metro Style Apps, more. Free future releases when you subscribe now! >>> http://p.sf.net/sfu/learndevnow-dev2 >>> _______________________________________________ >>> mesa-users mailing list >>> mes...@li... >>> https://lists.sourceforge.net/lists/listinfo/mesa-users >> >> >> >> >>------------------------------ >> >>------------------------------------------------------------------------------ >>Try before you buy = See our experts in action! >>The most comprehensive online learning library for Microsoft developers >>is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, >>Metro Style Apps, more. Free future releases when you subscribe now! >>http://p.sf.net/sfu/learndevnow-dev2 >> >>------------------------------ >> >>_______________________________________________ >>mesa-users mailing list >>mes...@li... >>https://lists.sourceforge.net/lists/listinfo/mesa-users >> >> >>End of mesa-users Digest, Vol 30, Issue 2 >>***************************************** > > -- > This message has been scanned for viruses and > dangerous content by MailScanner, and is > believed to be clean. > > ------------------------------------------------------------------------------ > Try before you buy = See our experts in action! > The most comprehensive online learning library for Microsoft developers > is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, > Metro Style Apps, more. Free future releases when you subscribe now! > http://p.sf.net/sfu/learndevnow-dev2_______________________________________________ > mesa-users mailing list > mes...@li... > https://lists.sourceforge.net/lists/listinfo/mesa-users > -- This message has been scanned for viruses and dangerous content by MailScanner, and is believed to be clean. |
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From: 吴涛 <gg...@12...> - 2012-02-06 06:20:46
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how to set the mesh grid, i want to increase the mesh grid numbers. thx songling At 2012-02-04 15:36:24,mes...@li... wrote: >Send mesa-users mailing list submissions to > mes...@li... > >To subscribe or unsubscribe via the World Wide Web, visit > https://lists.sourceforge.net/lists/listinfo/mesa-users >or, via email, send a message with subject or body 'help' to > mes...@li... > >You can reach the person managing the list at > mes...@li... > >When replying, please edit your Subject line so it is more specific >than "Re: Contents of mesa-users digest..." > > >Today's Topics: > > 1. Re: error installing rev 3851 (const package) (Jean-Claude Passy) > 2. Re: error installing rev 3851 (const package) (Richard Townsend) > 3. Re: error installing rev 3851 (const package) (Jean-Claude Passy) > 4. problem with running ./rn... (Burak Ulas) > 5. Re: problem with running ./rn... (Richard Townsend) > 6. problem compiling version 3851 on red hat (Phil Arras) > 7. Re: problem compiling version 3851 on red hat (Francis Timmes) > > >---------------------------------------------------------------------- > >Message: 1 >Date: Wed, 01 Feb 2012 11:58:37 -0600 >From: Jean-Claude Passy <jc...@gm...> >Subject: Re: [mesa-users] error installing rev 3851 (const package) >To: Richard Townsend <tow...@as...> >Cc: "mes...@li..." > <mes...@li...> >Message-ID: <4F2...@uv...> >Content-Type: text/plain; charset=ISO-8859-1; format=flowed > >Oh, sorry... ifort cannot be used with SDK? > >Thanks, > >JC > >On 01/02/12 10:46, Richard Townsend wrote: >> For some reason, the Intel Fortran compiler (ifort) is being used instead of gfortran (the SDK compiler). Can you check that utils/makefile_header defines FC as gfortran? >> >> cheers, >> >> Rich >> >> On Feb 1, 2012, at 10:48 AM, Jean-Claude Passy wrote: >> >>> Hi all, >>> >>> I get an error when trying to install rev 3851 using mesasdk on my Mac 10.6.8: >>> >>> -------------------------------------------------------------------------- >>> [10:40:03] Obiwan:$ ./install >>> checking if ndiff is installed ... >>> yes! >>> >>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>> building const package. >>> >>> ifort -fno-range-check -fopenmp -I../public -I../private -I../../include -Wunused-value -Werror -W -fimplicit-none -O2 -c -ffixed-form -ffixed-line-length-132 ../public/const_def.f >>> ifort: command line warning #10006: ignoring unknown option '-fno-range-check' >>> ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type >>> ifort: command line remark #10148: option '-Werror' not supported >>> ifort: command line error: option '-W' is ambiguous >>> make: *** [const_def.o] Error 1 >>> >>> /Users/jean-claudepassy/Work/MESA/mesa2/const/make >>> FAILED >>> >>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>> ./build_and_test FAILED >>> -------------------------------------------------------------------------- >>> >>> This error looks (way too) familiar but I have not be able to find anything on the list... >>> Thanks a lot for your help, >>> >>> JC >>> ------------------------------------------------------------------------------ >>> Keep Your Developer Skills Current with LearnDevNow! >>> The most comprehensive online learning library for Microsoft developers >>> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, >>> Metro Style Apps, more. Free future releases when you subscribe now! >>> http://p.sf.net/sfu/learndevnow-d2d_______________________________________________ >>> mesa-users mailing list >>> mes...@li... >>> https://lists.sourceforge.net/lists/listinfo/mesa-users > > > >------------------------------ > >Message: 2 >Date: Wed, 1 Feb 2012 12:57:20 -0600 >From: Richard Townsend <tow...@as...> >Subject: Re: [mesa-users] error installing rev 3851 (const package) >To: jc...@uv... >Cc: "mes...@li..." > <mes...@li...> >Message-ID: <2E7...@as...> >Content-Type: text/plain; charset=iso-8859-1 > >Unfortunately not; the idea of the SDK is to provide a complete kit (compiler, tools & libraries) for building MESA. > >It's worth noting that the gfortran compiler produces code that is not much slower than ifort. More importantly, it is less buggy and has more support for Fortran 2003/2008 features. > >cheers, > >Rich > >On Feb 1, 2012, at 11:58 AM, Jean-Claude Passy wrote: > >> Oh, sorry... ifort cannot be used with SDK? >> >> Thanks, >> >> JC >> >> On 01/02/12 10:46, Richard Townsend wrote: >>> For some reason, the Intel Fortran compiler (ifort) is being used instead of gfortran (the SDK compiler). Can you check that utils/makefile_header defines FC as gfortran? >>> >>> cheers, >>> >>> Rich >>> >>> On Feb 1, 2012, at 10:48 AM, Jean-Claude Passy wrote: >>> >>>> Hi all, >>>> >>>> I get an error when trying to install rev 3851 using mesasdk on my Mac 10.6.8: >>>> >>>> -------------------------------------------------------------------------- >>>> [10:40:03] Obiwan:$ ./install >>>> checking if ndiff is installed ... >>>> yes! >>>> >>>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>>> building const package. >>>> >>>> ifort -fno-range-check -fopenmp -I../public -I../private -I../../include -Wunused-value -Werror -W -fimplicit-none -O2 -c -ffixed-form -ffixed-line-length-132 ../public/const_def.f >>>> ifort: command line warning #10006: ignoring unknown option '-fno-range-check' >>>> ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type >>>> ifort: command line remark #10148: option '-Werror' not supported >>>> ifort: command line error: option '-W' is ambiguous >>>> make: *** [const_def.o] Error 1 >>>> >>>> /Users/jean-claudepassy/Work/MESA/mesa2/const/make >>>> FAILED >>>> >>>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>>> ./build_and_test FAILED >>>> -------------------------------------------------------------------------- >>>> >>>> This error looks (way too) familiar but I have not be able to find anything on the list... >>>> Thanks a lot for your help, >>>> >>>> JC >>>> ------------------------------------------------------------------------------ >>>> Keep Your Developer Skills Current with LearnDevNow! >>>> The most comprehensive online learning library for Microsoft developers >>>> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, >>>> Metro Style Apps, more. Free future releases when you subscribe now! >>>> http://p.sf.net/sfu/learndevnow-d2d_______________________________________________ >>>> mesa-users mailing list >>>> mes...@li... >>>> https://lists.sourceforge.net/lists/listinfo/mesa-users > > > > >------------------------------ > >Message: 3 >Date: Wed, 01 Feb 2012 14:04:45 -0600 >From: Jean-Claude Passy <jc...@gm...> >Subject: Re: [mesa-users] error installing rev 3851 (const package) >To: Richard Townsend <tow...@as...> >Cc: "mes...@li..." > <mes...@li...> >Message-ID: <4F2...@uv...> >Content-Type: text/plain; charset=ISO-8859-1; format=flowed > >Thanks Nate and Richard for your explanations. >Cheers, > >JC > >On 01/02/12 12:57, Richard Townsend wrote: >> Unfortunately not; the idea of the SDK is to provide a complete kit (compiler, tools& libraries) for building MESA. >> >> It's worth noting that the gfortran compiler produces code that is not much slower than ifort. More importantly, it is less buggy and has more support for Fortran 2003/2008 features. >> >> cheers, >> >> Rich >> >> On Feb 1, 2012, at 11:58 AM, Jean-Claude Passy wrote: >> >>> Oh, sorry... ifort cannot be used with SDK? >>> >>> Thanks, >>> >>> JC >>> >>> On 01/02/12 10:46, Richard Townsend wrote: >>>> For some reason, the Intel Fortran compiler (ifort) is being used instead of gfortran (the SDK compiler). Can you check that utils/makefile_header defines FC as gfortran? >>>> >>>> cheers, >>>> >>>> Rich >>>> >>>> On Feb 1, 2012, at 10:48 AM, Jean-Claude Passy wrote: >>>> >>>>> Hi all, >>>>> >>>>> I get an error when trying to install rev 3851 using mesasdk on my Mac 10.6.8: >>>>> >>>>> -------------------------------------------------------------------------- >>>>> [10:40:03] Obiwan:$ ./install >>>>> checking if ndiff is installed ... >>>>> yes! >>>>> >>>>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>>>> building const package. >>>>> >>>>> ifort -fno-range-check -fopenmp -I../public -I../private -I../../include -Wunused-value -Werror -W -fimplicit-none -O2 -c -ffixed-form -ffixed-line-length-132 ../public/const_def.f >>>>> ifort: command line warning #10006: ignoring unknown option '-fno-range-check' >>>>> ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type >>>>> ifort: command line remark #10148: option '-Werror' not supported >>>>> ifort: command line error: option '-W' is ambiguous >>>>> make: *** [const_def.o] Error 1 >>>>> >>>>> /Users/jean-claudepassy/Work/MESA/mesa2/const/make >>>>> FAILED >>>>> >>>>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>>>> ./build_and_test FAILED >>>>> -------------------------------------------------------------------------- >>>>> >>>>> This error looks (way too) familiar but I have not be able to find anything on the list... >>>>> Thanks a lot for your help, >>>>> >>>>> JC >>>>> ------------------------------------------------------------------------------ >>>>> Keep Your Developer Skills Current with LearnDevNow! >>>>> The most comprehensive online learning library for Microsoft developers >>>>> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, >>>>> Metro Style Apps, more. Free future releases when you subscribe now! >>>>> http://p.sf.net/sfu/learndevnow-d2d_______________________________________________ >>>>> mesa-users mailing list >>>>> mes...@li... >>>>> https://lists.sourceforge.net/lists/listinfo/mesa-users > > > >------------------------------ > >Message: 4 >Date: Thu, 2 Feb 2012 05:46:51 -0800 (PST) >From: Burak Ulas <bu...@ym...> >Subject: [mesa-users] problem with running ./rn... >To: mesa <mes...@li...> >Message-ID: > <132...@we...> >Content-Type: text/plain; charset="us-ascii" > >Dear all, > >I met with following problem when I type the command ./rn : > >./rn: line 5: ./star: No such file or directory > >I think the program searches another executable called "star" to run. I could not manage to find it in anywhere of mesa directory. > > >Could it be a installation problem from beginning? > > >Any suggestion would be appritiated. > > >Best regards, > >Burak. >-------------- next part -------------- >An HTML attachment was scrubbed... > >------------------------------ > >Message: 5 >Date: Thu, 2 Feb 2012 07:53:43 -0600 >From: Richard Townsend <tow...@as...> >Subject: Re: [mesa-users] problem with running ./rn... >To: Burak Ulas <bu...@ym...> >Cc: mesa <mes...@li...> >Message-ID: <53F...@as...> >Content-Type: text/plain; charset=us-ascii > >Have you tried doing './mk' first, to build the executable? > >cheers, > >Rich > >On Feb 2, 2012, at 7:46 AM, Burak Ulas wrote: > >> Dear all, >> >> I met with following problem when I type the command ./rn : >> >> ./rn: line 5: ./star: No such file or directory >> >> I think the program searches another executable called "star" to run. I could not manage to find it in anywhere of mesa directory. >> >> Could it be a installation problem from beginning? >> >> Any suggestion would be appritiated. >> >> Best regards, >> >> Burak. >> ------------------------------------------------------------------------------ >> Keep Your Developer Skills Current with LearnDevNow! >> The most comprehensive online learning library for Microsoft developers >> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, >> Metro Style Apps, more. Free future releases when you subscribe now! >> http://p.sf.net/sfu/learndevnow-d2d_______________________________________________ >> mesa-users mailing list >> mes...@li... >> https://lists.sourceforge.net/lists/listinfo/mesa-users > > > > >------------------------------ > >Message: 6 >Date: Fri, 3 Feb 2012 14:51:03 -0500 (EST) >From: Phil Arras <pl...@ma...> >Subject: [mesa-users] problem compiling version 3851 on red hat >To: mes...@li... >Cc: Phil Arras <ar...@vi...> >Message-ID: > <alp...@Ye...> >Content-Type: TEXT/PLAIN; format=flowed; charset=US-ASCII > > >Hello, > >I'm trying to install mesa with red hat CentOS 5.7 and intel fortran 12, >and without using sdk (as no root access on this machine). > >mesa successfully installed with USE_PGSTAR = NO in makefile_header. > >mesa's version of pgplot was then compiled with ifort, and seemed to work >in that the demos ran. the environment variable PGPLOT_DIR was set to the >correct directory. > >I then did ./clean and tried the recommended flags to install mesa with >pgstar on red hat: > >USE_PGSTAR = YES >LOAD_PGPLOT = -L${PGPLOT_DIR} -lpgplot -L/usr/lib64 -lX11 -lsvml -lpng >FCstatic = -shared-intel #-Bstatic -static-intel > >Compilation went a long way, but then failed on mesa star with the >following error message: > >--------------------------------------------------------------------------- > >ifort -vec-report0 -traceback -error-limit 6 -openmp -threads -o ../star >\ > run_star_extras.o run_star.o run.o -L../../make -lstar >-L../../../lib -ldiffusion -lionization -latm -lcolors -lmlt -leos -lkap >-lnet -lscreen -lrates -lreaclib >-lweak -lneu -lchem -linterp_2d -linterp_1d -lnum -lutils -lalert -lconst >-lmtx -lmesaklu -lmesalapack -lmesablas -L/local/stars/mesa/utils/pgplot >-lpgplot -L/usr/lib64 >-lX11 -lsvml -lpng >ld: ../star: hidden symbol `__intel_cpu_indicator_init' in >/astro64/intel/compiler12/composerxe-2011.2.137/compiler/lib/intel64/libirc.a(cpu_disp.o) >is referenced by DSO >ld: final link failed: Nonrepresentable section on output >make: *** [star] Error 1 >FAILED >/local/stars/mesa/star/test >FAILED >/local/stars/mesa/star >./build_and_test FAILED > >------------------------------------------------------------------------------ > > >Does anyone have ideas on how to fix this? Thanks!!! > >Cheers, > >Phil > > > >------------------------------ > >Message: 7 >Date: Sat, 04 Feb 2012 00:36:10 -0700 >From: Francis Timmes <fx...@ma...> >Subject: Re: [mesa-users] problem compiling version 3851 on red hat >To: Phil Arras <pl...@ma...> >Cc: mes...@li..., Phil Arras <ar...@vi...> >Message-ID: <E0F...@ma...> >Content-Type: text/plain; CHARSET=US-ASCII > >hi phil, > >i don't know and do not have access to ubuntu, >but here are some suggestions: > >did you source the intel environment scripts? > >> composerxe-2011.2.137 > >this is a bit dated. can you use the latest version, 12.1.2 20111207 ? > >you may have linked a version of OpenMP library which is >older than your compiler or your MKL. make sure everything points >to the same version of the compiler. > >you could also try using the -Bstatic flag in the definition >of FCstatic instead of -shared-intel > >you may also find this link helpful >http://software.intel.com/en-us/articles/using-intel-compilers-for-linux-with-ubuntu/ > >what c compiler & version did you use when compiling pgplot? > >fxt > > > >On Feb 3, 2012, at 12:51 PM, Phil Arras wrote: > >> >> Hello, >> >> I'm trying to install mesa with red hat CentOS 5.7 and intel fortran 12, >> and without using sdk (as no root access on this machine). >> >> mesa successfully installed with USE_PGSTAR = NO in makefile_header. >> >> mesa's version of pgplot was then compiled with ifort, and seemed to work >> in that the demos ran. the environment variable PGPLOT_DIR was set to the >> correct directory. >> >> I then did ./clean and tried the recommended flags to install mesa with >> pgstar on red hat: >> >> USE_PGSTAR = YES >> LOAD_PGPLOT = -L${PGPLOT_DIR} -lpgplot -L/usr/lib64 -lX11 -lsvml -lpng >> FCstatic = -shared-intel #-Bstatic -static-intel >> >> Compilation went a long way, but then failed on mesa star with the >> following error message: >> >> --------------------------------------------------------------------------- >> >> ifort -vec-report0 -traceback -error-limit 6 -openmp -threads -o ../star >> \ >> run_star_extras.o run_star.o run.o -L../../make -lstar >> -L../../../lib -ldiffusion -lionization -latm -lcolors -lmlt -leos -lkap >> -lnet -lscreen -lrates -lreaclib >> -lweak -lneu -lchem -linterp_2d -linterp_1d -lnum -lutils -lalert -lconst >> -lmtx -lmesaklu -lmesalapack -lmesablas -L/local/stars/mesa/utils/pgplot >> -lpgplot -L/usr/lib64 >> -lX11 -lsvml -lpng >> ld: ../star: hidden symbol `__intel_cpu_indicator_init' in >> /astro64/intel/compiler12/composerxe-2011.2.137/compiler/lib/intel64/libirc.a(cpu_disp.o) >> is referenced by DSO >> ld: final link failed: Nonrepresentable section on output >> make: *** [star] Error 1 >> FAILED >> /local/stars/mesa/star/test >> FAILED >> /local/stars/mesa/star >> ./build_and_test FAILED >> >> ------------------------------------------------------------------------------ >> >> >> Does anyone have ideas on how to fix this? Thanks!!! >> >> Cheers, >> >> Phil >> >> ------------------------------------------------------------------------------ >> Try before you buy = See our experts in action! >> The most comprehensive online learning library for Microsoft developers >> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, >> Metro Style Apps, more. Free future releases when you subscribe now! >> http://p.sf.net/sfu/learndevnow-dev2 >> _______________________________________________ >> mesa-users mailing list >> mes...@li... >> https://lists.sourceforge.net/lists/listinfo/mesa-users > > > > >------------------------------ > >------------------------------------------------------------------------------ >Try before you buy = See our experts in action! >The most comprehensive online learning library for Microsoft developers >is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, >Metro Style Apps, more. Free future releases when you subscribe now! >http://p.sf.net/sfu/learndevnow-dev2 > >------------------------------ > >_______________________________________________ >mesa-users mailing list >mes...@li... >https://lists.sourceforge.net/lists/listinfo/mesa-users > > >End of mesa-users Digest, Vol 30, Issue 2 >***************************************** |
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From: Francis T. <fx...@ma...> - 2012-02-06 04:49:01
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alternatively, follow the direction for downloading the mesasdk on the same page under "Installing MESA" fxt On Feb 5, 2012, at 9:47 PM, Francis Timmes wrote: > please follow the command line directions given on > http://mesa.sourceforge.net/getting_started.html > under "Downloading MESA". > > fxt > > > On Feb 5, 2012, at 9:23 PM, im...@ru... wrote: > >> Hello! >> >> I am trying to download MESA. The link, which is shown in the MESA >> webpage is not work. Anybody can help? >> >> Regrads, >> Imad Thaysen >> >> >> ------------------------------------------------------------------------------ >> Try before you buy = See our experts in action! >> The most comprehensive online learning library for Microsoft developers >> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, >> Metro Style Apps, more. Free future releases when you subscribe now! >> http://p.sf.net/sfu/learndevnow-dev2 >> _______________________________________________ >> mesa-users mailing list >> mes...@li... >> https://lists.sourceforge.net/lists/listinfo/mesa-users > |
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From: Francis T. <fx...@ma...> - 2012-02-06 04:48:17
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please follow the command line directions given on http://mesa.sourceforge.net/getting_started.html under "Downloading MESA". fxt On Feb 5, 2012, at 9:23 PM, im...@ru... wrote: > Hello! > > I am trying to download MESA. The link, which is shown in the MESA > webpage is not work. Anybody can help? > > Regrads, > Imad Thaysen > > > ------------------------------------------------------------------------------ > Try before you buy = See our experts in action! > The most comprehensive online learning library for Microsoft developers > is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, > Metro Style Apps, more. Free future releases when you subscribe now! > http://p.sf.net/sfu/learndevnow-dev2 > _______________________________________________ > mesa-users mailing list > mes...@li... > https://lists.sourceforge.net/lists/listinfo/mesa-users |
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From: <im...@ru...> - 2012-02-06 04:23:18
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Hello! I am trying to download MESA. The link, which is shown in the MESA webpage is not work. Anybody can help? Regrads, Imad Thaysen |
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From: Francis T. <fx...@ma...> - 2012-02-04 07:36:24
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hi phil, i don't know and do not have access to ubuntu, but here are some suggestions: did you source the intel environment scripts? > composerxe-2011.2.137 this is a bit dated. can you use the latest version, 12.1.2 20111207 ? you may have linked a version of OpenMP library which is older than your compiler or your MKL. make sure everything points to the same version of the compiler. you could also try using the -Bstatic flag in the definition of FCstatic instead of -shared-intel you may also find this link helpful http://software.intel.com/en-us/articles/using-intel-compilers-for-linux-with-ubuntu/ what c compiler & version did you use when compiling pgplot? fxt On Feb 3, 2012, at 12:51 PM, Phil Arras wrote: > > Hello, > > I'm trying to install mesa with red hat CentOS 5.7 and intel fortran 12, > and without using sdk (as no root access on this machine). > > mesa successfully installed with USE_PGSTAR = NO in makefile_header. > > mesa's version of pgplot was then compiled with ifort, and seemed to work > in that the demos ran. the environment variable PGPLOT_DIR was set to the > correct directory. > > I then did ./clean and tried the recommended flags to install mesa with > pgstar on red hat: > > USE_PGSTAR = YES > LOAD_PGPLOT = -L${PGPLOT_DIR} -lpgplot -L/usr/lib64 -lX11 -lsvml -lpng > FCstatic = -shared-intel #-Bstatic -static-intel > > Compilation went a long way, but then failed on mesa star with the > following error message: > > --------------------------------------------------------------------------- > > ifort -vec-report0 -traceback -error-limit 6 -openmp -threads -o ../star > \ > run_star_extras.o run_star.o run.o -L../../make -lstar > -L../../../lib -ldiffusion -lionization -latm -lcolors -lmlt -leos -lkap > -lnet -lscreen -lrates -lreaclib > -lweak -lneu -lchem -linterp_2d -linterp_1d -lnum -lutils -lalert -lconst > -lmtx -lmesaklu -lmesalapack -lmesablas -L/local/stars/mesa/utils/pgplot > -lpgplot -L/usr/lib64 > -lX11 -lsvml -lpng > ld: ../star: hidden symbol `__intel_cpu_indicator_init' in > /astro64/intel/compiler12/composerxe-2011.2.137/compiler/lib/intel64/libirc.a(cpu_disp.o) > is referenced by DSO > ld: final link failed: Nonrepresentable section on output > make: *** [star] Error 1 > FAILED > /local/stars/mesa/star/test > FAILED > /local/stars/mesa/star > ./build_and_test FAILED > > ------------------------------------------------------------------------------ > > > Does anyone have ideas on how to fix this? Thanks!!! > > Cheers, > > Phil > > ------------------------------------------------------------------------------ > Try before you buy = See our experts in action! > The most comprehensive online learning library for Microsoft developers > is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, > Metro Style Apps, more. Free future releases when you subscribe now! > http://p.sf.net/sfu/learndevnow-dev2 > _______________________________________________ > mesa-users mailing list > mes...@li... > https://lists.sourceforge.net/lists/listinfo/mesa-users |
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From: Phil A. <pl...@ma...> - 2012-02-03 20:15:51
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Hello,
I'm trying to install mesa with red hat CentOS 5.7 and intel fortran 12,
and without using sdk (as no root access on this machine).
mesa successfully installed with USE_PGSTAR = NO in makefile_header.
mesa's version of pgplot was then compiled with ifort, and seemed to work
in that the demos ran. the environment variable PGPLOT_DIR was set to the
correct directory.
I then did ./clean and tried the recommended flags to install mesa with
pgstar on red hat:
USE_PGSTAR = YES
LOAD_PGPLOT = -L${PGPLOT_DIR} -lpgplot -L/usr/lib64 -lX11 -lsvml -lpng
FCstatic = -shared-intel #-Bstatic -static-intel
Compilation went a long way, but then failed on mesa star with the
following error message:
---------------------------------------------------------------------------
ifort -vec-report0 -traceback -error-limit 6 -openmp -threads -o ../star
\
run_star_extras.o run_star.o run.o -L../../make -lstar
-L../../../lib -ldiffusion -lionization -latm -lcolors -lmlt -leos -lkap
-lnet -lscreen -lrates -lreaclib
-lweak -lneu -lchem -linterp_2d -linterp_1d -lnum -lutils -lalert -lconst
-lmtx -lmesaklu -lmesalapack -lmesablas -L/local/stars/mesa/utils/pgplot
-lpgplot -L/usr/lib64
-lX11 -lsvml -lpng
ld: ../star: hidden symbol `__intel_cpu_indicator_init' in
/astro64/intel/compiler12/composerxe-2011.2.137/compiler/lib/intel64/libirc.a(cpu_disp.o)
is referenced by DSO
ld: final link failed: Nonrepresentable section on output
make: *** [star] Error 1
FAILED
/local/stars/mesa/star/test
FAILED
/local/stars/mesa/star
./build_and_test FAILED
------------------------------------------------------------------------------
Does anyone have ideas on how to fix this? Thanks!!!
Cheers,
Phil
|
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From: Richard T. <tow...@as...> - 2012-02-02 13:53:54
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Have you tried doing './mk' first, to build the executable? cheers, Rich On Feb 2, 2012, at 7:46 AM, Burak Ulas wrote: > Dear all, > > I met with following problem when I type the command ./rn : > > ./rn: line 5: ./star: No such file or directory > > I think the program searches another executable called "star" to run. I could not manage to find it in anywhere of mesa directory. > > Could it be a installation problem from beginning? > > Any suggestion would be appritiated. > > Best regards, > > Burak. > ------------------------------------------------------------------------------ > Keep Your Developer Skills Current with LearnDevNow! > The most comprehensive online learning library for Microsoft developers > is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, > Metro Style Apps, more. Free future releases when you subscribe now! > http://p.sf.net/sfu/learndevnow-d2d_______________________________________________ > mesa-users mailing list > mes...@li... > https://lists.sourceforge.net/lists/listinfo/mesa-users |
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From: Burak U. <bu...@ym...> - 2012-02-02 13:46:57
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Dear all, I met with following problem when I type the command ./rn : ./rn: line 5: ./star: No such file or directory I think the program searches another executable called "star" to run. I could not manage to find it in anywhere of mesa directory. Could it be a installation problem from beginning? Any suggestion would be appritiated. Best regards, Burak. |
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From: Jean-Claude P. <jc...@gm...> - 2012-02-01 19:57:57
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Thanks Nate and Richard for your explanations. Cheers, JC On 01/02/12 12:57, Richard Townsend wrote: > Unfortunately not; the idea of the SDK is to provide a complete kit (compiler, tools& libraries) for building MESA. > > It's worth noting that the gfortran compiler produces code that is not much slower than ifort. More importantly, it is less buggy and has more support for Fortran 2003/2008 features. > > cheers, > > Rich > > On Feb 1, 2012, at 11:58 AM, Jean-Claude Passy wrote: > >> Oh, sorry... ifort cannot be used with SDK? >> >> Thanks, >> >> JC >> >> On 01/02/12 10:46, Richard Townsend wrote: >>> For some reason, the Intel Fortran compiler (ifort) is being used instead of gfortran (the SDK compiler). Can you check that utils/makefile_header defines FC as gfortran? >>> >>> cheers, >>> >>> Rich >>> >>> On Feb 1, 2012, at 10:48 AM, Jean-Claude Passy wrote: >>> >>>> Hi all, >>>> >>>> I get an error when trying to install rev 3851 using mesasdk on my Mac 10.6.8: >>>> >>>> -------------------------------------------------------------------------- >>>> [10:40:03] Obiwan:$ ./install >>>> checking if ndiff is installed ... >>>> yes! >>>> >>>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>>> building const package. >>>> >>>> ifort -fno-range-check -fopenmp -I../public -I../private -I../../include -Wunused-value -Werror -W -fimplicit-none -O2 -c -ffixed-form -ffixed-line-length-132 ../public/const_def.f >>>> ifort: command line warning #10006: ignoring unknown option '-fno-range-check' >>>> ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type >>>> ifort: command line remark #10148: option '-Werror' not supported >>>> ifort: command line error: option '-W' is ambiguous >>>> make: *** [const_def.o] Error 1 >>>> >>>> /Users/jean-claudepassy/Work/MESA/mesa2/const/make >>>> FAILED >>>> >>>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>>> ./build_and_test FAILED >>>> -------------------------------------------------------------------------- >>>> >>>> This error looks (way too) familiar but I have not be able to find anything on the list... >>>> Thanks a lot for your help, >>>> >>>> JC >>>> ------------------------------------------------------------------------------ >>>> Keep Your Developer Skills Current with LearnDevNow! >>>> The most comprehensive online learning library for Microsoft developers >>>> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, >>>> Metro Style Apps, more. Free future releases when you subscribe now! >>>> http://p.sf.net/sfu/learndevnow-d2d_______________________________________________ >>>> mesa-users mailing list >>>> mes...@li... >>>> https://lists.sourceforge.net/lists/listinfo/mesa-users |
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From: Richard T. <tow...@as...> - 2012-02-01 18:57:32
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Unfortunately not; the idea of the SDK is to provide a complete kit (compiler, tools & libraries) for building MESA. It's worth noting that the gfortran compiler produces code that is not much slower than ifort. More importantly, it is less buggy and has more support for Fortran 2003/2008 features. cheers, Rich On Feb 1, 2012, at 11:58 AM, Jean-Claude Passy wrote: > Oh, sorry... ifort cannot be used with SDK? > > Thanks, > > JC > > On 01/02/12 10:46, Richard Townsend wrote: >> For some reason, the Intel Fortran compiler (ifort) is being used instead of gfortran (the SDK compiler). Can you check that utils/makefile_header defines FC as gfortran? >> >> cheers, >> >> Rich >> >> On Feb 1, 2012, at 10:48 AM, Jean-Claude Passy wrote: >> >>> Hi all, >>> >>> I get an error when trying to install rev 3851 using mesasdk on my Mac 10.6.8: >>> >>> -------------------------------------------------------------------------- >>> [10:40:03] Obiwan:$ ./install >>> checking if ndiff is installed ... >>> yes! >>> >>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>> building const package. >>> >>> ifort -fno-range-check -fopenmp -I../public -I../private -I../../include -Wunused-value -Werror -W -fimplicit-none -O2 -c -ffixed-form -ffixed-line-length-132 ../public/const_def.f >>> ifort: command line warning #10006: ignoring unknown option '-fno-range-check' >>> ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type >>> ifort: command line remark #10148: option '-Werror' not supported >>> ifort: command line error: option '-W' is ambiguous >>> make: *** [const_def.o] Error 1 >>> >>> /Users/jean-claudepassy/Work/MESA/mesa2/const/make >>> FAILED >>> >>> /Users/jean-claudepassy/Work/MESA/mesa2/const >>> ./build_and_test FAILED >>> -------------------------------------------------------------------------- >>> >>> This error looks (way too) familiar but I have not be able to find anything on the list... >>> Thanks a lot for your help, >>> >>> JC >>> ------------------------------------------------------------------------------ >>> Keep Your Developer Skills Current with LearnDevNow! >>> The most comprehensive online learning library for Microsoft developers >>> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, >>> Metro Style Apps, more. Free future releases when you subscribe now! >>> http://p.sf.net/sfu/learndevnow-d2d_______________________________________________ >>> mesa-users mailing list >>> mes...@li... >>> https://lists.sourceforge.net/lists/listinfo/mesa-users |
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From: Jean-Claude P. <jc...@gm...> - 2012-02-01 17:51:51
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Oh, sorry... ifort cannot be used with SDK? Thanks, JC On 01/02/12 10:46, Richard Townsend wrote: > For some reason, the Intel Fortran compiler (ifort) is being used instead of gfortran (the SDK compiler). Can you check that utils/makefile_header defines FC as gfortran? > > cheers, > > Rich > > On Feb 1, 2012, at 10:48 AM, Jean-Claude Passy wrote: > >> Hi all, >> >> I get an error when trying to install rev 3851 using mesasdk on my Mac 10.6.8: >> >> -------------------------------------------------------------------------- >> [10:40:03] Obiwan:$ ./install >> checking if ndiff is installed ... >> yes! >> >> /Users/jean-claudepassy/Work/MESA/mesa2/const >> building const package. >> >> ifort -fno-range-check -fopenmp -I../public -I../private -I../../include -Wunused-value -Werror -W -fimplicit-none -O2 -c -ffixed-form -ffixed-line-length-132 ../public/const_def.f >> ifort: command line warning #10006: ignoring unknown option '-fno-range-check' >> ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type >> ifort: command line remark #10148: option '-Werror' not supported >> ifort: command line error: option '-W' is ambiguous >> make: *** [const_def.o] Error 1 >> >> /Users/jean-claudepassy/Work/MESA/mesa2/const/make >> FAILED >> >> /Users/jean-claudepassy/Work/MESA/mesa2/const >> ./build_and_test FAILED >> -------------------------------------------------------------------------- >> >> This error looks (way too) familiar but I have not be able to find anything on the list... >> Thanks a lot for your help, >> >> JC >> ------------------------------------------------------------------------------ >> Keep Your Developer Skills Current with LearnDevNow! >> The most comprehensive online learning library for Microsoft developers >> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, >> Metro Style Apps, more. Free future releases when you subscribe now! >> http://p.sf.net/sfu/learndevnow-d2d_______________________________________________ >> mesa-users mailing list >> mes...@li... >> https://lists.sourceforge.net/lists/listinfo/mesa-users |
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From: Richard T. <tow...@as...> - 2012-02-01 16:46:45
|
For some reason, the Intel Fortran compiler (ifort) is being used instead of gfortran (the SDK compiler). Can you check that utils/makefile_header defines FC as gfortran? cheers, Rich On Feb 1, 2012, at 10:48 AM, Jean-Claude Passy wrote: > Hi all, > > I get an error when trying to install rev 3851 using mesasdk on my Mac 10.6.8: > > -------------------------------------------------------------------------- > [10:40:03] Obiwan:$ ./install > checking if ndiff is installed ... > yes! > > /Users/jean-claudepassy/Work/MESA/mesa2/const > building const package. > > ifort -fno-range-check -fopenmp -I../public -I../private -I../../include -Wunused-value -Werror -W -fimplicit-none -O2 -c -ffixed-form -ffixed-line-length-132 ../public/const_def.f > ifort: command line warning #10006: ignoring unknown option '-fno-range-check' > ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type > ifort: command line remark #10148: option '-Werror' not supported > ifort: command line error: option '-W' is ambiguous > make: *** [const_def.o] Error 1 > > /Users/jean-claudepassy/Work/MESA/mesa2/const/make > FAILED > > /Users/jean-claudepassy/Work/MESA/mesa2/const > ./build_and_test FAILED > -------------------------------------------------------------------------- > > This error looks (way too) familiar but I have not be able to find anything on the list... > Thanks a lot for your help, > > JC > ------------------------------------------------------------------------------ > Keep Your Developer Skills Current with LearnDevNow! > The most comprehensive online learning library for Microsoft developers > is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, > Metro Style Apps, more. Free future releases when you subscribe now! > http://p.sf.net/sfu/learndevnow-d2d_______________________________________________ > mesa-users mailing list > mes...@li... > https://lists.sourceforge.net/lists/listinfo/mesa-users |
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From: Jean-Claude P. <jc...@gm...> - 2012-02-01 16:41:38
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Hi all, I get an error when trying to install rev 3851 using mesasdk on my Mac 10.6.8: -------------------------------------------------------------------------- [10:40:03] Obiwan:$ ./install checking if ndiff is installed ... yes! /Users/jean-claudepassy/Work/MESA/mesa2/const building const package. ifort -fno-range-check -fopenmp -I../public -I../private -I../../include -Wunused-value -Werror -W -fimplicit-none -O2 -c -ffixed-form -ffixed-line-length-132 ../public/const_def.f ifort: command line warning #10006: ignoring unknown option '-fno-range-check' ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type ifort: command line remark #10148: option '-Werror' not supported ifort: command line error: option '-W' is ambiguous make: *** [const_def.o] Error 1 /Users/jean-claudepassy/Work/MESA/mesa2/const/make FAILED /Users/jean-claudepassy/Work/MESA/mesa2/const ./build_and_test FAILED -------------------------------------------------------------------------- This error looks (way too) familiar but I have not be able to find anything on the list... Thanks a lot for your help, JC |
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From: Richard T. <tow...@as...> - 2012-02-01 15:39:49
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This problem arises when the Fortran compiler encounters a module (.mod) file created by a previous version of the compiler. To fix, you need to rebuild your installation. In the top-level directory, do a './clean' and then an './install' cheers, Rich On Feb 1, 2012, at 9:34 AM, Prof M. N. Anandaram wrote: > Hi Bill: > Thanks for the file attached. Before trying that I moved > /sample out of mesa as advised, filled the paths and ran ./mk. > Here is the text of fatal error which occurred: > ----------------------------------------------------------------------------------------- > [mysample] $ ./mk > gfortran -fno-range-check -ffree-form -I/home/clawuser/mesa/include -c ../src/sample.f > ../src/sample.f:25.17: > use eos_def > 1 > Fatal Error: Wrong module version '7' (expected '0') for file 'eos_def.mod' opened at (1) > make: *** [sample.o] Error 1 > ------------------------------------------------------------------------------------------- > What shd I do now? > > Anand > > From: Bill Paxton <pa...@ki...> > To: Prof M. N. Anandaram <ana...@ya...> > Sent: Monday, January 30, 2012 9:25 PM > Subject: Re: [mesa-users] mesa install -- succeeds at last! > > Hi, > > Glad you persisted! here's a corrected version of the inlist file that should be in star/test for the appetizer. > > > Now that you have made the big step of getting mesa installed, please don't hesitate to send me > emails if I can help you to use it. > > Best wishes, > Bill > > > > > ------------------------------------------------------------------------------ > Keep Your Developer Skills Current with LearnDevNow! > The most comprehensive online learning library for Microsoft developers > is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, > Metro Style Apps, more. Free future releases when you subscribe now! > http://p.sf.net/sfu/learndevnow-d2d_______________________________________________ > mesa-users mailing list > mes...@li... > https://lists.sourceforge.net/lists/listinfo/mesa-users |
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From: Prof M. N. A. <ana...@ya...> - 2012-02-01 15:34:29
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Hi Bill: Thanks for the file attached. Before trying that I moved /sample out of mesa as advised, filled the paths and ran ./mk. Here is the text of fatal error which occurred: ----------------------------------------------------------------------------------------- [mysample] $ ./mk gfortran -fno-range-check -ffree-form -I/home/clawuser/mesa/include -c ../src/sample.f ../src/sample.f:25.17: use eos_def 1 Fatal Error: Wrong module version '7' (expected '0') for file 'eos_def.mod' opened at (1) make: *** [sample.o] Error 1 ------------------------------------------------------------------------------------------- What shd I do now? Anand From: Bill Paxton <pa...@ki...> To: Prof M. N. Anandaram <ana...@ya...> Sent: Monday, January 30, 2012 9:25 PM Subject: Re: [mesa-users] mesa install -- succeeds at last! Hi, Glad you persisted! here's a corrected version of the inlist file that should be in star/test for the appetizer. Now that you have made the big step of getting mesa installed, please don't hesitate to send me emails if I can help you to use it. Best wishes, Bill |
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From: V.L.Bending <v.l...@op...> - 2012-01-31 12:29:58
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Hi all, I'm a new user trying to run some low-mass objects as on pages 58-62 of the MESA introductory paper (0.1 down to 0.001 solar masses), but am having convergence problems partway through the run - any tips? (No problems with install, build, or running higher-mass stars!) Thanks, Vicky -- The Open University is incorporated by Royal Charter (RC 000391), an exempt charity in England & Wales and a charity registered in Scotland (SC 038302). |
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From: Richard T. <tow...@as...> - 2012-01-30 18:32:08
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On Jan 30, 2012, at 9:30 AM, Prof M. N. Anandaram wrote: > I now install csh by 'sudo apt-get install csh' > and then run clean install. > This time the whole process runs smoothly like a symphony > and the sweet message of successful install of MESA finally appears! > So here I appreciate your hard work in creating mesasdk and > thank you for your help and time. That's great -- I'm glad it finally worked out! > > There is only one query here about the setting of OMP_NUM_THREADS=n: > My PC uses Intel i3 chip which has 2 cores(=cpus) and 4 threads. > While I did set n=2 per your advice should I not set n=4 ? > Either n=2 or n=4 will work. I suggest you try both choices, to see which works fastest; I'm guessing n=2 will be best, but am keen to hear your experiences. cheers, Rich > Anyway I look forward to trying Bill's appetizer next! > > Anandaram > > From: Richard Townsend <tow...@as...> > To: Prof M. N. Anandaram <ana...@ya...> > Cc: "mes...@li..." <mes...@li...> > Sent: Sunday, January 29, 2012 8:17 PM > Subject: Re: [mesa-users] mesa install in linux VM fails at the [adipls] stage ! > > You need a C shell installed to build adipls --- either csh or tcsh. > > cheers, > > Rich > > > > |
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From: Richard T. <tow...@as...> - 2012-01-30 18:16:05
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Hi Chris -- There were some significant changes between 1.2 and 1.5 which can cause breakages. Is this with or without the SDK? A while back, I modified the SDK to built its own PNG support into PGPLOT, in order to deal with this very issue -- but I may not have truly fixed the problem. cheers, Rich On Jan 30, 2012, at 12:51 AM, Chris Mankovich wrote: > Hello all, > > I am unable to dump png's from pgstar due to issues with the library version: > > libpng warning: Application built with libpng-1.2.10 but running with 1.5.6 > PGPLOT /png: error in libpng while writing file png/main00001.png, plotting disabled > > The result is that the 'png' folder is full of empty files. Is it truly a problem to have the more recent version? If so, how can I tell pgplot to ignore the warning from libpng? > > Thanks, > Chris > ------------------------------------------------------------------------------ > Try before you buy = See our experts in action! > The most comprehensive online learning library for Microsoft developers > is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, > Metro Style Apps, more. Free future releases when you subscribe now! > http://p.sf.net/sfu/learndevnow-dev2_______________________________________________ > mesa-users mailing list > mes...@li... > https://lists.sourceforge.net/lists/listinfo/mesa-users |
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From: Prof M. N. A. <ana...@ya...> - 2012-01-30 15:30:53
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I now install csh by 'sudo apt-get install csh' and then run clean install. This time the whole process runs smoothly like a symphony and the sweet message of successful install of MESA finally appears! So here I appreciate your hard work in creating mesasdk and thank you for your help and time. There is only one query here about the setting of OMP_NUM_THREADS=n: My PC uses Intel i3 chip which has 2 cores(=cpus) and 4 threads. While I did set n=2 per your advice should I not set n=4 ? Anyway I look forward to trying Bill's appetizer next! Anandaram From: Richard Townsend <tow...@as...> To: Prof M. N. Anandaram <ana...@ya...> Cc: "mes...@li..." <mes...@li...> Sent: Sunday, January 29, 2012 8:17 PM Subject: Re: [mesa-users] mesa install in linux VM fails at the [adipls] stage ! You need a C shell installed to build adipls --- either csh or tcsh. cheers, Rich |
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