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Re: [Matplotlib-users] netcdf4-python build
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From: Michael R. <raw...@ya...> - 2012-09-19 19:15:08
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________________________________ From: Jeff Whitaker <jef...@no...> To: Michael Rawlins <raw...@ya...>; Matplotlib Users <mat...@li...> Sent: Wednesday, September 19, 2012 2:35 PM Subject: Re: [Matplotlib-users] netcdf4-python build On 9/19/12 11:30 AM, Michael Rawlins wrote: > >Ubuntu 12.04 > > >hdf5-tools installed from package manager > > >netcdf-bin and python-netcdf installed from package manager > > >I downloaded netCDF4-1.0fix1.tar.gz from http://code.google.com/p/netcdf4-python/downloads/list > > >> python setup.py build > > > > >/usr/bin/ld: cannot find -lhdf5_hl >/usr/bin/ld: cannot find -lhdf5 >collect2: ld returned 1 exit status >/usr/bin/ld: cannot find -lhdf5_hl >/usr/bin/ld: cannot find -lhdf5 >collect2: ld returned 1 exit status >error: Command "gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-i686-2.7/netCDF4.o -L/usr/local/lib -L/usr/local/lib -Wl,-R/usr/local/lib -Wl,-R/usr/local/lib -lnetcdf -lhdf5_hl -lhdf5 -lz -o build/lib.linux-i686-2.7/netCDF4.so" failed with exit status 1 > > > Michael: You're missing the hdf5 library. You should be able to install that (along with the netcdf version 4 library) using the Ubuntu package manager. I don't know what the relevant package names are. See the docs at netcdf4-python.googlecode.com for installation instructions (including how to install the dependencies). You can also file a help request there and I'll see it (since this is not really a basemap issue). -Jeff Just installed h5utils from package manager. Getting same errors. In package manager I'm searching on hdf5. If there's a package there I'm missing, then it certainly is not obvious. Mike -- Jeffrey S. Whitaker Phone : (303)497-6313 Meteorologist FAX : (303)497-6449 NOAA/OAR/PSD R/PSD1 Email : Jef...@no... 325 Broadway Office : Skaggs Research Cntr 1D-113 Boulder, CO, USA 80303-3328 Web : http://tinyurl.com/5telg |
